FFCP PHASE1:Hg19::chr1:40781042..40781053,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1298 | |EntrezGene=1298 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2218 | |HGNC=2218 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_ENST00000488463_5end | |association_with_transcript=56bp_to_ENST00000488463_5end | ||
|cluster_id=chr1:40781042..40781053,- | |||
|description=CAGE_peak_9_at_COL9A2_5end | |description=CAGE_peak_9_at_COL9A2_5end | ||
|id=chr1:40781042..40781053,- | |id=chr1:40781042..40781053,- | ||
|ontology_enrichment_celltype=CL:0000123;3.00e-22;2!CL:0000242;3.00e-22;2!CL:0000312;1.80e-09;5!CL:0000240;4.90e-08;6!CL:0000311;4.90e-08;6!CL:0000079;4.90e-08;6!CL:0000237;4.90e-08;6 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000123;3.00e-22;2!CL:0000242;3.00e-22;2!CL:0000312;1.80e-09;5!CL:0000240;4.90e-08;6!CL:0000311;4.90e-08;6!CL:0000079;4.90e-08;6!CL:0000237;4.90e-08;6 | ||
|ontology_enrichment_disease=DOID:0060060;4.52e-12;1!DOID:0060061;4.52e-12;1!DOID:8691;4.52e-12;1!DOID:8692;5.25e-08;31!DOID:1240;5.38e-08;39 | |ontology_enrichment_celltype_v019_2=CL:0000242,1.66e-22,2;CL:0000312,1.42e-09,5;CL:0000240,4.04e-08,6;CL:0000311,4.04e-08,6;CL:0000079,4.04e-08,6;CL:0000237,4.04e-08,6;CL:0000036,4.04e-08,6;CL:0000357,4.04e-08,6;CL:0000114,4.04e-08,6 | ||
|ontology_enrichment_uberon=UBERON:0002336;9.60e-12;1!UBERON:0003112;9.60e-12;1!UBERON:0011215;9.60e-12;1!UBERON:0001018;9.60e-12;1!UBERON:0011158;9.60e-12;1!UBERON:0002473;9.60e-12;1!UBERON:0005340;9.60e-12;1!UBERON:0003544;9.60e-12;1!UBERON:0005970;9.60e-12;1!UBERON:0002316;9.60e-12;1!UBERON:0001020;9.60e-12;1!UBERON:0003128;9.60e-12;1!UBERON:0002437;9.60e-12;1!UBERON:0001703;9.60e-12;1!UBERON:0002241;9.60e-12;1!UBERON:0002331;2.45e-10;10!UBERON:0000178;4.73e-07;15!UBERON:0000179;4.73e-07;15!UBERON:0000463;4.73e-07;15!UBERON:0001003;6.84e-07;15!UBERON:0007376;6.84e-07;15 | |ontology_enrichment_development_v019=CL:0000357;4.90e-08;6!CL:0000114;4.90e-08;6 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;4.52e-12;1!DOID:0060061;4.52e-12;1!DOID:8691;4.52e-12;1!DOID:8692;5.25e-08;31!DOID:1240;5.38e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.53e-12,1;DOID:0060061,4.53e-12,1;DOID:8691,4.53e-12,1;DOID:2531,2.35e-09,51;DOID:0060083,2.35e-09,51;DOID:1240,3.33e-09,39;DOID:8692,2.87e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.21e-26!57;UBERON:0005068!6.21e-26!57;UBERON:0006241!6.21e-26!57;UBERON:0007135!6.21e-26!57;UBERON:0005743!2.71e-23!86;UBERON:0002616!6.04e-23!59;UBERON:0000955!8.06e-23!69;UBERON:0006238!8.06e-23!69;UBERON:0003075!1.89e-22!86;UBERON:0007284!1.89e-22!86;UBERON:0001017!2.26e-22!82;UBERON:0002346!5.93e-22!90;UBERON:0000073!9.10e-22!94;UBERON:0001016!9.10e-22!94;UBERON:0000033!5.18e-19!123;UBERON:0000153!5.48e-19!129;UBERON:0007811!5.48e-19!129;UBERON:0002780!7.22e-19!41;UBERON:0001890!7.22e-19!41;UBERON:0006240!7.22e-19!41;UBERON:0002020!1.82e-18!34;UBERON:0003528!1.82e-18!34;UBERON:0001893!2.04e-18!34;UBERON:0003080!3.17e-18!42;UBERON:0002791!1.28e-17!33;UBERON:0003056!5.26e-17!61;UBERON:0007023!1.35e-16!115;UBERON:0004121!3.59e-16!169;UBERON:0000924!4.02e-16!173;UBERON:0006601!4.02e-16!173;UBERON:0001869!5.22e-16!32;UBERON:0000956!2.46e-12!25;UBERON:0000203!2.46e-12!25;UBERON:0002619!4.17e-11!22;UBERON:0001950!1.06e-10!20;UBERON:0004733!1.80e-09!12;UBERON:0002028!1.80e-09!12;UBERON:0007277!1.80e-09!12;UBERON:0002298!2.18e-09!8;UBERON:0003076!6.11e-09!15;UBERON:0003057!6.11e-09!15;UBERON:0004732!1.44e-08!13;UBERON:0002308!7.48e-08!9;UBERON:0000125!7.48e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;9.60e-12;1!UBERON:0003112;9.60e-12;1!UBERON:0011215;9.60e-12;1!UBERON:0001018;9.60e-12;1!UBERON:0011158;9.60e-12;1!UBERON:0002473;9.60e-12;1!UBERON:0005340;9.60e-12;1!UBERON:0003544;9.60e-12;1!UBERON:0005970;9.60e-12;1!UBERON:0002316;9.60e-12;1!UBERON:0001020;9.60e-12;1!UBERON:0003128;9.60e-12;1!UBERON:0002437;9.60e-12;1!UBERON:0001703;9.60e-12;1!UBERON:0002241;9.60e-12;1!UBERON:0002331;2.45e-10;10!UBERON:0000178;4.73e-07;15!UBERON:0000179;4.73e-07;15!UBERON:0000463;4.73e-07;15!UBERON:0001003;6.84e-07;15!UBERON:0007376;6.84e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,1.07e-11,1;UBERON:0011215,1.07e-11,1;UBERON:0001018,1.07e-11,1;UBERON:0002473,1.07e-11,1;UBERON:0005340,1.07e-11,1;UBERON:0003544,1.07e-11,1;UBERON:0005970,1.07e-11,1;UBERON:0002316,1.07e-11,1;UBERON:0001020,1.07e-11,1;UBERON:0002437,1.07e-11,1;UBERON:0003112,1.63e-11,1;UBERON:0011158,1.63e-11,1;UBERON:0003128,1.63e-11,1;UBERON:0001703,1.63e-11,1;UBERON:0002241,1.63e-11,1;UBERON:0004761,1.63e-11,1;UBERON:0009617,1.63e-11,1;UBERON:0002331,2.42e-10,10;UBERON:0000358,2.42e-10,10;UBERON:0000307,2.42e-10,10;UBERON:0000091,2.42e-10,10;UBERON:0000087,2.42e-10,10;UBERON:0007010,2.42e-10,10;UBERON:0007806,2.42e-10,10;UBERON:0008780,2.42e-10,10;UBERON:0005728,2.42e-10,10;UBERON:0000178,4.68e-07,15;UBERON:0000179,4.68e-07,15;UBERON:0000463,4.68e-07,15;UBERON:0001003,5.99e-07,15;UBERON:0007376,5.99e-07,15;UBERON:0007383,5.99e-07,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0.940364164434263,0,0.273748850145768,0.376627918784408,0,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0.232401601740905,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.443458794925128,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0.128343036279748,0,1.30139853857622,0,0.167516265334349,0,0,0,0.414415513436035,0.49076596687656,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.851692475380653,0,1.84344458585075,1.78940886313933,1.33479313369527,1.17232857241224,0.278406173895242,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0,0,1.02314474045374,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,1.37897349296586,0,0,0.885741385813839,0,1.52581736317083,0.221158519862449,0,0.438770794307945,0,0,0.0769502585037971,0,0,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74433805888995,3.33622635155558,3.86361213170185,1.34802265961354,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,1.57732412567589,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.393915911536118,0.412079291905832,0.471824806979294,0,0,0,0.544813624446302,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0.500763722825999,0.573409195690071,0.665574309221114,0.683060432355218,0,0.37494122388632,0,0.285465333544967,0,1.87333962322753,4.0577888011031,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0.163565394255844,0,0,0,2.39984875025916,0.426766918776564,0,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.642292250964595,0,0.319267718114302,0.41023272848151,0,0.276629009856872,1.13032951942296,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.443910671357348,0.546974809018219,0,0,0,0,0,0,0,0,0,0.230467975111559,0.514464028312255,0.611727596791485,0.460409414939944,0,0,0,0.314231179832004,0,0,0,0,0.571812353413251,0,0,0,0,0,0.3414369541879,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0.458729283404541,0.860037498908708,0,0.475940431336403,0,0,0.371995018166751,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.827463966895162,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p9@COL9A2 | |short_description=p9@COL9A2 | ||
}} | }} |
Latest revision as of 01:05, 18 September 2015
Short description: | p9@COL9A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_COL9A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 56bp_to_ENST00000488463_5end |
EntrezGene: | COL9A2 |
HGNC: | 2218 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.66e-22 | 2 |
keratinocyte | 1.42e-09 | 5 |
stratified squamous epithelial cell | 4.04e-08 | 6 |
keratin accumulating cell | 4.04e-08 | 6 |
stratified epithelial cell | 4.04e-08 | 6 |
keratinizing barrier epithelial cell | 4.04e-08 | 6 |
epithelial fate stem cell | 4.04e-08 | 6 |
stratified epithelial stem cell | 4.04e-08 | 6 |
surface ectodermal cell | 4.04e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 1.07e-11 | 1 |
central nervous system cell part cluster | 1.07e-11 | 1 |
axon tract | 1.07e-11 | 1 |
intercerebral commissure | 1.07e-11 | 1 |
dorsal telencephalic commissure | 1.07e-11 | 1 |
brain white matter | 1.07e-11 | 1 |
brain commissure | 1.07e-11 | 1 |
white matter | 1.07e-11 | 1 |
nervous system commissure | 1.07e-11 | 1 |
cerebral hemisphere white matter | 1.07e-11 | 1 |
olfactory region | 1.63e-11 | 1 |
primary subdivision of skull | 1.63e-11 | 1 |
cranium | 1.63e-11 | 1 |
neurocranium | 1.63e-11 | 1 |
chondrocranium | 1.63e-11 | 1 |
cartilaginous neurocranium | 1.63e-11 | 1 |
head paraxial mesoderm | 1.63e-11 | 1 |
umbilical cord | 2.42e-10 | 10 |
blastocyst | 2.42e-10 | 10 |
blastula | 2.42e-10 | 10 |
bilaminar disc | 2.42e-10 | 10 |
inner cell mass | 2.42e-10 | 10 |
cleaving embryo | 2.42e-10 | 10 |
connecting stalk | 2.42e-10 | 10 |
inner cell mass derived epiblast | 2.42e-10 | 10 |
extraembryonic mesoderm | 2.42e-10 | 10 |
blood | 4.68e-07 | 15 |
haemolymphatic fluid | 4.68e-07 | 15 |
organism substance | 4.68e-07 | 15 |
skin epidermis | 5.99e-07 | 15 |
outer epithelium | 5.99e-07 | 15 |
enveloping layer of ectoderm | 5.99e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.53e-12 | 1 |
cutaneous T cell lymphoma | 4.53e-12 | 1 |
mycosis fungoides | 4.53e-12 | 1 |
hematologic cancer | 2.35e-09 | 51 |
immune system cancer | 2.35e-09 | 51 |
leukemia | 3.33e-09 | 39 |
myeloid leukemia | 2.87e-08 | 31 |