FFCP PHASE1:Hg19::chr10:33624127..33624173,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8829 | |EntrezGene=8829 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8004 | |HGNC=8004 | ||
|TSSclassifier=strong | |||
|UniProt=Q6AWA9 | |UniProt=Q6AWA9 | ||
|association_with_transcript=-121bp_to_uc001ixc.1_5end | |association_with_transcript=-121bp_to_uc001ixc.1_5end | ||
|cluster_id=chr10:33624127..33624173,- | |||
|description=CAGE_peak_8_at_NRP1_5end | |description=CAGE_peak_8_at_NRP1_5end | ||
|id=chr10:33624127..33624173,- | |id=chr10:33624127..33624173,- | ||
|ontology_enrichment_celltype=CL:0000057!1.01e-11!75;CL:0000055!3.27e-11!180;CL:0000222!2.97e-08!119;CL:0002620!3.49e-08!23 | |ontology_enrichment_celltype=CL:0000057!1.01e-11!75;CL:0000055!3.27e-11!180;CL:0000222!2.97e-08!119;CL:0002620!3.49e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.83e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.99e-12,76;CL:0002620,1.73e-08,23;CL:0000222,4.90e-08,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.12e-15!659;UBERON:0000475!8.24e-14!365;UBERON:0000467!1.87e-13!625;UBERON:0000480!3.72e-13!626;UBERON:0002100!1.34e-11!216;UBERON:0005256!3.39e-11!143;UBERON:0003914!4.20e-11!118;UBERON:0000119!7.92e-10!312;UBERON:0000481!8.18e-10!347;UBERON:0000477!1.04e-09!286;UBERON:0002049!1.16e-09!79;UBERON:0007798!1.16e-09!79;UBERON:0000483!1.82e-09!309;UBERON:0004111!3.72e-09!241;UBERON:0004872!7.84e-09!84;UBERON:0000490!9.96e-09!138;UBERON:0001981!1.92e-08!60;UBERON:0007500!1.92e-08!60;UBERON:0004537!1.92e-08!60;UBERON:0006965!1.92e-08!60;UBERON:0002050!5.66e-08!605;UBERON:0005423!5.66e-08!605;UBERON:0000055!7.03e-08!69;UBERON:0000923!8.60e-08!604;UBERON:0005291!8.60e-08!604;UBERON:0006598!8.60e-08!604;UBERON:0002532!8.60e-08!604;UBERON:0000922!1.11e-07!612;UBERON:0000062!1.13e-07!511;UBERON:0003102!1.46e-07!95;UBERON:0000914!1.95e-07!83;UBERON:0002329!1.95e-07!83;UBERON:0003077!1.95e-07!83;UBERON:0003059!1.95e-07!83;UBERON:0007282!1.95e-07!83;UBERON:0009618!1.95e-07!83;UBERON:0007285!1.95e-07!83;UBERON:0000025!4.75e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.75e-07;33!UBERON:0004571;5.75e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.52e-10,117;UBERON:0003104,5.82e-10,160;UBERON:0009142,5.82e-10,160;UBERON:0002049,1.14e-09,78;UBERON:0007798,1.14e-09,78;UBERON:0000490,2.24e-09,148;UBERON:0005256,2.34e-09,122;UBERON:0002100,4.03e-09,199;UBERON:0004872,4.94e-09,83;UBERON:0007500,2.73e-08,59;UBERON:0001981,2.73e-08,59;UBERON:0004537,2.73e-08,59;UBERON:0006965,2.73e-08,59;UBERON:0000119,3.60e-08,309;UBERON:0000055,6.48e-08,68;UBERON:0000483,7.80e-08,306;UBERON:0004111,3.89e-07,240;UBERON:0001009,6.20e-07,112;UBERON:0003102,6.61e-07,99 | |||
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| ||
|short_description=p8@NRP1 | |short_description=p8@NRP1 | ||
}} | }} |
Latest revision as of 01:07, 18 September 2015
Short description: | p8@NRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NRP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -121bp_to_uc001ixc.1_5end |
EntrezGene: | NRP1 |
HGNC: | 8004 |
UniProt: | Q6AWA9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.99e-12 | 76 |
skin fibroblast | 1.73e-08 | 23 |
mesodermal cell | 4.90e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.52e-10 | 117 |
mesenchyme | 5.82e-10 | 160 |
entire embryonic mesenchyme | 5.82e-10 | 160 |
vasculature | 1.14e-09 | 78 |
vascular system | 1.14e-09 | 78 |
unilaminar epithelium | 2.24e-09 | 148 |
trunk mesenchyme | 2.34e-09 | 122 |
trunk | 4.03e-09 | 199 |
splanchnic layer of lateral plate mesoderm | 4.94e-09 | 83 |
epithelial tube open at both ends | 2.73e-08 | 59 |
blood vessel | 2.73e-08 | 59 |
blood vasculature | 2.73e-08 | 59 |
vascular cord | 2.73e-08 | 59 |
cell layer | 3.60e-08 | 309 |
vessel | 6.48e-08 | 68 |
epithelium | 7.80e-08 | 306 |
anatomical conduit | 3.89e-07 | 240 |
circulatory system | 6.20e-07 | 112 |
surface structure | 6.61e-07 | 99 |