FFCP PHASE1:Hg19::chr1:40916251..40916260,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65243 | |EntrezGene=65243 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28053 | |HGNC=28053 | ||
|TSSclassifier=strong | |||
|UniProt=D3DPV3,Q9UJL9 | |UniProt=D3DPV3,Q9UJL9 | ||
|association_with_transcript=-76bp_to_NM_023070,uc001cfn.1_5end | |association_with_transcript=-76bp_to_NM_023070,uc001cfn.1_5end | ||
|cluster_id=chr1:40916251..40916260,+ | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_7_at_ZNF643_5end | |description=CAGE_peak_7_at_ZNF643_5end | ||
|id=chr1:40916251..40916260,+ | |id=chr1:40916251..40916260,+ | ||
|ontology_enrichment_celltype=CL:0000080!1.14e-11!6;CL:0000064!4.66e-11!3;CL:0005012!4.66e-11!3;CL:0000067!4.66e-11!3;CL:0002304!4.66e-11!3 | |ontology_enrichment_celltype=CL:0000080!1.14e-11!6;CL:0000064!4.66e-11!3;CL:0005012!4.66e-11!3;CL:0000067!4.66e-11!3;CL:0002304!4.66e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0000138;8.34e-18;6!CL:0000153;2.31e-12;9!CL:0000447;2.31e-12;9!CL:0000062;2.31e-12;9!CL:0000327;5.74e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.67e-18,6;CL:0000138,7.67e-18,6;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000062,2.37e-10,11;CL:0000375,2.37e-10,11;CL:0000335,2.37e-10,11;CL:0000327,5.55e-08,15 | |||
|ontology_enrichment_development_v019=CL:0000335;2.27e-10;11 | |||
|ontology_enrichment_disease=DOID:3371!3.06e-09!1;DOID:4549!3.06e-09!1;DOID:5861!3.06e-09!1;DOID:6496!3.06e-09!1 | |ontology_enrichment_disease=DOID:3371!3.06e-09!1;DOID:4549!3.06e-09!1;DOID:5861!3.06e-09!1;DOID:6496!3.06e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;1.55e-98;1!DOID:4549;1.55e-98;1!DOID:5861;1.55e-98;1!DOID:6496;1.55e-98;1!DOID:201;8.34e-18;6!DOID:0060100;8.34e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.37e-99,1;DOID:4549,9.37e-99,1;DOID:5861,9.37e-99,1;DOID:6496,9.37e-99,1;DOID:201,7.67e-18,6;DOID:0060100,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0001778!4.66e-11!3;UBERON:0001775!4.66e-11!3;UBERON:0007190!1.05e-08!1;UBERON:0000488!1.65e-08!4;UBERON:0002331!3.42e-07!10;UBERON:0000358!3.42e-07!10;UBERON:0000307!3.42e-07!10;UBERON:0000091!3.42e-07!10;UBERON:0000087!3.42e-07!10;UBERON:0007806!3.42e-07!10;UBERON:0008780!3.42e-07!10;UBERON:0005728!3.42e-07!10 | |ontology_enrichment_uberon=UBERON:0001778!4.66e-11!3;UBERON:0001775!4.66e-11!3;UBERON:0007190!1.05e-08!1;UBERON:0000488!1.65e-08!4;UBERON:0002331!3.42e-07!10;UBERON:0000358!3.42e-07!10;UBERON:0000307!3.42e-07!10;UBERON:0000091!3.42e-07!10;UBERON:0000087!3.42e-07!10;UBERON:0007806!3.42e-07!10;UBERON:0008780!3.42e-07!10;UBERON:0005728!3.42e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;5.04e-34;3!UBERON:0004755;5.04e-34;3!UBERON:0001474;3.88e-23;18!UBERON:0004765;1.86e-16;26!UBERON:0001434;4.27e-13;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,4.27e-34,3;UBERON:0004755,4.27e-34,3 | |||
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|short_description=p7@ZNF643 | |short_description=p7@ZNF643 | ||
}} | }} |
Latest revision as of 01:36, 18 September 2015
Short description: | p7@ZNF643 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ZNF643_5end |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | -76bp_to_NM_023070, uc001cfn.1_5end |
EntrezGene: | ZNF643 |
HGNC: | 28053 |
UniProt: | D3DPV3Q9UJL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.67e-18 | 6 |
chondrocyte | 7.67e-18 | 6 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
osteoblast | 2.37e-10 | 11 |
osteoprogenitor cell | 2.37e-10 | 11 |
mesenchyme condensation cell | 2.37e-10 | 11 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 4.27e-34 | 3 |
skeletal tissue | 4.27e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.37e-99 | 1 |
extraosseous chondrosarcoma | 9.37e-99 | 1 |
myxoid chondrosarcoma | 9.37e-99 | 1 |
extraskeletal myxoid chondrosarcoma | 9.37e-99 | 1 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |