FFCP PHASE1:Hg19::chr7:27213831..27213839,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3206 | |EntrezGene=3206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5100 | |HGNC=5100 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_AB464570,DQ891906,DQ895092,DQ896836_5end | |association_with_transcript=34bp_to_AB464570,DQ891906,DQ895092,DQ896836_5end | ||
|cluster_id=chr7:27213831..27213839,- | |||
|description=CAGE_peak_17_at_HOXA10_5end | |description=CAGE_peak_17_at_HOXA10_5end | ||
|id=chr7:27213831..27213839,- | |id=chr7:27213831..27213839,- | ||
|ontology_enrichment_celltype=CL:0000135!3.84e-08!3;CL:0000386!3.84e-08!3;CL:0000388!3.84e-08!3;CL:0002622!7.69e-07!3 | |ontology_enrichment_celltype=CL:0000135!3.84e-08!3;CL:0000386!3.84e-08!3;CL:0000388!3.84e-08!3;CL:0002622!7.69e-07!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.18e-12;10 | |ontology_enrichment_development_v019=UBERON:0005795;2.18e-12;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;9.43e-11;3!DOID:127;9.43e-11;3!DOID:3119;4.56e-09;14!DOID:0060072;2.18e-08;4 | |ontology_enrichment_disease_v019=DOID:0060084;9.43e-11;3!DOID:127;9.43e-11;3!DOID:3119;4.56e-09;14!DOID:0060072;2.18e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.09e-10,3;DOID:127,1.09e-10,3;DOID:3119,3.88e-09,14;DOID:0060072,2.43e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000043!3.84e-08!3 | |ontology_enrichment_uberon=UBERON:0000043!3.84e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0006834;7.47e-30;1!UBERON:0000995;9.63e-16;17!UBERON:0003975;6.52e-15;18!UBERON:0004175;6.85e-13;21!UBERON:0003134;4.68e-08;33 | |ontology_enrichment_uberon_v019=UBERON:0006834;7.47e-30;1!UBERON:0000995;9.63e-16;17!UBERON:0003975;6.52e-15;18!UBERON:0004175;6.85e-13;21!UBERON:0003134;4.68e-08;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,7.48e-30,1;UBERON:0000995,7.43e-13,21;UBERON:0005795,2.64e-12,22;UBERON:0003975,2.64e-12,22;UBERON:0004175,6.47e-11,25;UBERON:0003134,1.36e-07,37;UBERON:0000474,1.36e-07,37;UBERON:0003100,6.54e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.434539556882471,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.309157587715317,0,0.18611685633159,0.168776332241266,0.292311015483596,0.252433774244115,0.184099797284599,0,0,0.302256294682921,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.322260734604821,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.383010740264733,0.423347165447766,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0.687010689511529,0,0,0,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.868124974666461,0,0,0,0,0,0,0,0,1.15425387755696,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,1.08599920350743,0,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615976841137482,0,0.971421986118279,0,1.39265542612958,0.118920090777569,0.11294608203896,0,0,0,0,1.41095188908457,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,2.68931177202306,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.434539556882471,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.309157587715317,0,0.18611685633159,0.168776332241266,0.292311015483596,0.252433774244115,0.184099797284599,0,0,0.302256294682921,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.322260734604821,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.383010740264733,0.423347165447766,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0.687010689511529,0,0,0,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.868124974666461,0,0,0,0,0,0,0,0,1.15425387755696,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,1.08599920350743,0,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615976841137482,0,0.971421986118279,0,1.39265542612958,0.118920090777569,0.11294608203896,0,0,0,0,1.41095188908457,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,2.68931177202306,0.406896178315738,0,0,0 | ||
|short_description=p17@HOXA10 | |short_description=p17@HOXA10 | ||
}} | }} |
Latest revision as of 01:56, 18 September 2015
Short description: | p17@HOXA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_HOXA10_5end |
Coexpression cluster: | NA |
Association with transcript: | 34bp_to_AB464570, DQ891906, DQ895092, DQ896836_5end |
EntrezGene: | HOXA10 |
HGNC: | 5100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 7.48e-30 | 1 |
uterus | 7.43e-13 | 21 |
embryonic uterus | 2.64e-12 | 22 |
internal female genitalia | 2.64e-12 | 22 |
internal genitalia | 6.47e-11 | 25 |
female reproductive organ | 1.36e-07 | 37 |
female reproductive system | 1.36e-07 | 37 |
female organism | 6.54e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.09e-10 | 3 |
leiomyoma | 1.09e-10 | 3 |
gastrointestinal system cancer | 3.88e-09 | 14 |
benign neoplasm | 2.43e-08 | 4 |