FFCP PHASE1:Hg19::chr2:68479697..68479708,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5534 | |EntrezGene=5534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9317 | |HGNC=9317 | ||
|TSSclassifier=strong | |||
|UniProt=P63098 | |UniProt=P63098 | ||
|association_with_transcript=-34bp_to_ENST00000234310_5end | |association_with_transcript=-34bp_to_ENST00000234310_5end | ||
|cluster_id=chr2:68479697..68479708,- | |||
|coexpression_cluster_id=C494 | |||
|description=CAGE_peak_2_at_PPP3R1_5end | |description=CAGE_peak_2_at_PPP3R1_5end | ||
|id=chr2:68479697..68479708,- | |id=chr2:68479697..68479708,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.75e-27!115;UBERON:0001049!1.70e-21!57;UBERON:0005068!1.70e-21!57;UBERON:0006241!1.70e-21!57;UBERON:0007135!1.70e-21!57;UBERON:0001017!1.62e-19!82;UBERON:0001869!1.63e-18!32;UBERON:0002616!1.93e-18!59;UBERON:0005743!1.42e-17!86;UBERON:0000073!1.47e-17!94;UBERON:0001016!1.47e-17!94;UBERON:0002020!1.52e-17!34;UBERON:0003528!1.52e-17!34;UBERON:0003080!1.87e-17!42;UBERON:0001893!3.51e-17!34;UBERON:0000955!4.85e-17!69;UBERON:0006238!4.85e-17!69;UBERON:0002780!6.54e-17!41;UBERON:0001890!6.54e-17!41;UBERON:0006240!6.54e-17!41;UBERON:0002791!1.50e-16!33;UBERON:0002619!2.09e-15!22;UBERON:0001950!3.61e-14!20;UBERON:0000956!3.69e-14!25;UBERON:0000203!3.69e-14!25;UBERON:0002346!6.40e-14!90;UBERON:0003075!1.87e-13!86;UBERON:0007284!1.87e-13!86;UBERON:0003056!7.77e-09!61;UBERON:0000153!3.71e-07!129;UBERON:0007811!3.71e-07!129;UBERON:0000924!6.49e-07!173;UBERON:0006601!6.49e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.78e-17;32!UBERON:0002619;7.26e-16;22!UBERON:0003528;1.08e-15;34!UBERON:0002020;1.08e-15;34!UBERON:0002791;1.24e-15;32!UBERON:0001893;5.28e-15;34!UBERON:0001950;1.38e-14;20!UBERON:0000956;2.32e-14;25!UBERON:0000203;2.32e-14;25!UBERON:0002780;1.51e-12;41!UBERON:0001890;1.51e-12;41!UBERON:0000073;7.02e-11;53!UBERON:0002616;7.02e-11;53!UBERON:0001017;9.91e-09;75!UBERON:0000955;1.18e-08;68!UBERON:0001016;2.96e-08;83!UBERON:0007023;1.15e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.59e-27,114;UBERON:0001049,5.81e-21,56;UBERON:0005068,5.81e-21,56;UBERON:0006241,5.81e-21,56;UBERON:0007135,5.81e-21,56;UBERON:0000073,6.05e-20,53;UBERON:0002616,6.05e-20,53;UBERON:0001017,4.99e-19,81;UBERON:0001016,6.10e-19,89;UBERON:0001869,1.57e-18,32;UBERON:0003528,1.47e-17,34;UBERON:0002020,1.47e-17,34;UBERON:0001893,3.39e-17,34;UBERON:0002780,6.38e-17,41;UBERON:0001890,6.38e-17,41;UBERON:0003080,6.38e-17,41;UBERON:0006240,6.38e-17,41;UBERON:0002791,7.26e-17,32;UBERON:0000955,1.48e-16,68;UBERON:0006238,1.48e-16,68;UBERON:0002619,2.03e-15,22;UBERON:0001950,3.51e-14,20;UBERON:0000956,3.59e-14,25;UBERON:0000203,3.59e-14,25;UBERON:0002346,1.40e-11,86;UBERON:0003075,4.03e-11,82;UBERON:0007284,4.03e-11,82;UBERON:0011216,1.16e-09,223;UBERON:0003056,8.43e-08,61;UBERON:0010371,5.23e-07,104 | |||
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| ||
|short_description=p2@PPP3R1 | |short_description=p2@PPP3R1 | ||
}} | }} |
Latest revision as of 02:13, 18 September 2015
Short description: | p2@PPP3R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPP3R1_5end |
Coexpression cluster: | C494_occipital_medial_brain_Whole_caudate_parietal_blood |
Association with transcript: | -34bp_to_ENST00000234310_5end |
EntrezGene: | PPP3R1 |
HGNC: | 9317 |
UniProt: | P63098 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.59e-27 | 114 |
neural tube | 5.81e-21 | 56 |
neural rod | 5.81e-21 | 56 |
future spinal cord | 5.81e-21 | 56 |
neural keel | 5.81e-21 | 56 |
regional part of nervous system | 6.05e-20 | 53 |
regional part of brain | 6.05e-20 | 53 |
central nervous system | 4.99e-19 | 81 |
nervous system | 6.10e-19 | 89 |
cerebral hemisphere | 1.57e-18 | 32 |
brain grey matter | 1.47e-17 | 34 |
gray matter | 1.47e-17 | 34 |
telencephalon | 3.39e-17 | 34 |
regional part of forebrain | 6.38e-17 | 41 |
forebrain | 6.38e-17 | 41 |
anterior neural tube | 6.38e-17 | 41 |
future forebrain | 6.38e-17 | 41 |
regional part of telencephalon | 7.26e-17 | 32 |
brain | 1.48e-16 | 68 |
future brain | 1.48e-16 | 68 |
regional part of cerebral cortex | 2.03e-15 | 22 |
neocortex | 3.51e-14 | 20 |
cerebral cortex | 3.59e-14 | 25 |
pallium | 3.59e-14 | 25 |
neurectoderm | 1.40e-11 | 86 |
neural plate | 4.03e-11 | 82 |
presumptive neural plate | 4.03e-11 | 82 |
organ system subdivision | 1.16e-09 | 223 |
pre-chordal neural plate | 8.43e-08 | 61 |
ecto-epithelium | 5.23e-07 | 104 |