FFCP PHASE1:Hg19::chr16:82660635..82660650,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1012 | |EntrezGene=1012 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1753 | |HGNC=1753 | ||
|TSSclassifier=strong | |||
|UniProt=P55290 | |UniProt=P55290 | ||
|association_with_transcript=-12bp_to_ENST00000268613_5end | |association_with_transcript=-12bp_to_ENST00000268613_5end | ||
|cluster_id=chr16:82660635..82660650,+ | |||
|coexpression_cluster_id=C3592 | |coexpression_cluster_id=C3592 | ||
|description=CAGE_peak_2_at_CDH13_5end | |description=CAGE_peak_2_at_CDH13_5end | ||
|id=chr16:82660635..82660650,+ | |id=chr16:82660635..82660650,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.75e-21!180;CL:0000220!4.25e-16!246;CL:0000222!4.68e-16!119;CL:0002321!9.51e-16!248;CL:0000057!1.67e-12!75;CL:0000680!6.77e-11!57;CL:0000056!6.77e-11!57;CL:0000355!6.77e-11!57;CL:0000187!6.00e-10!54;CL:0000183!1.20e-09!59;CL:0000192!5.64e-09!42;CL:0000514!5.64e-09!42;CL:0000359!1.03e-08!32;CL:0000393!1.05e-08!60;CL:0000211!1.05e-08!60;CL:0002139!2.26e-08!24 | |ontology_enrichment_celltype=CL:0000055!5.75e-21!180;CL:0000220!4.25e-16!246;CL:0000222!4.68e-16!119;CL:0002321!9.51e-16!248;CL:0000057!1.67e-12!75;CL:0000680!6.77e-11!57;CL:0000056!6.77e-11!57;CL:0000355!6.77e-11!57;CL:0000187!6.00e-10!54;CL:0000183!1.20e-09!59;CL:0000192!5.64e-09!42;CL:0000514!5.64e-09!42;CL:0000359!1.03e-08!32;CL:0000393!1.05e-08!60;CL:0000211!1.05e-08!60;CL:0002139!2.26e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.44e-08;24!CL:0000359;1.91e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.25e-16,121;CL:0002321,6.96e-15,250;CL:0000057,1.62e-13,76;CL:0000680,4.90e-11,58;CL:0000056,4.90e-11,58;CL:0000355,4.90e-11,58;CL:0000187,4.55e-10,55;CL:0000192,4.76e-09,43;CL:0000514,4.76e-09,43;CL:0000359,6.51e-09,32;CL:0002139,1.46e-08,24;CL:0000393,2.65e-08,61;CL:0000211,2.65e-08,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.47e-07!14 | |ontology_enrichment_disease=DOID:2394!3.47e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.17e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.42e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!6.63e-20!79;UBERON:0007798!6.63e-20!79;UBERON:0000055!1.88e-19!69;UBERON:0004872!3.21e-19!84;UBERON:0000483!5.46e-18!309;UBERON:0000119!7.91e-18!312;UBERON:0000475!1.26e-17!365;UBERON:0001981!1.97e-17!60;UBERON:0007500!1.97e-17!60;UBERON:0004537!1.97e-17!60;UBERON:0006965!1.97e-17!60;UBERON:0000477!3.70e-17!286;UBERON:0004111!7.28e-17!241;UBERON:0001009!1.30e-16!113;UBERON:0000468!4.86e-16!659;UBERON:0004535!2.14e-15!110;UBERON:0000914!2.79e-14!83;UBERON:0002329!2.79e-14!83;UBERON:0003077!2.79e-14!83;UBERON:0003059!2.79e-14!83;UBERON:0007282!2.79e-14!83;UBERON:0009618!2.79e-14!83;UBERON:0007285!2.79e-14!83;UBERON:0000486!7.43e-14!82;UBERON:0000467!8.91e-14!625;UBERON:0000480!1.61e-13!626;UBERON:0003914!2.19e-13!118;UBERON:0001637!8.61e-13!42;UBERON:0003509!8.61e-13!42;UBERON:0004572!8.61e-13!42;UBERON:0004290!1.10e-12!70;UBERON:0001134!4.63e-12!61;UBERON:0002036!4.63e-12!61;UBERON:0003082!4.63e-12!61;UBERON:0003102!7.94e-12!95;UBERON:0002385!9.67e-12!63;UBERON:0001015!9.67e-12!63;UBERON:0000383!9.67e-12!63;UBERON:0000481!1.69e-11!347;UBERON:0000025!8.67e-11!194;UBERON:0004573!3.84e-10!33;UBERON:0004571!3.84e-10!33;UBERON:0005256!5.32e-10!143;UBERON:0000490!1.28e-09!138;UBERON:0007100!1.72e-09!27;UBERON:0000948!4.07e-08!24;UBERON:0005498!4.07e-08!24;UBERON:0004140!4.07e-08!24;UBERON:0009881!4.07e-08!24;UBERON:0004141!4.07e-08!24;UBERON:0003084!4.07e-08!24;UBERON:0007005!4.07e-08!24;UBERON:0004139!4.07e-08!24;UBERON:0004291!4.07e-08!24;UBERON:0003103!1.06e-07!69;UBERON:0000947!1.09e-07!21;UBERON:0010191!1.09e-07!21;UBERON:0002097!1.18e-07!40;UBERON:0002199!1.21e-07!45;UBERON:0002416!1.21e-07!45;UBERON:0000033!3.70e-07!123;UBERON:0002050!6.36e-07!605;UBERON:0005423!6.36e-07!605;UBERON:0000922!8.46e-07!612;UBERON:0000923!8.65e-07!604;UBERON:0005291!8.65e-07!604;UBERON:0006598!8.65e-07!604;UBERON:0002532!8.65e-07!604;UBERON:0000153!9.72e-07!129;UBERON:0007811!9.72e-07!129 | |ontology_enrichment_uberon=UBERON:0002049!6.63e-20!79;UBERON:0007798!6.63e-20!79;UBERON:0000055!1.88e-19!69;UBERON:0004872!3.21e-19!84;UBERON:0000483!5.46e-18!309;UBERON:0000119!7.91e-18!312;UBERON:0000475!1.26e-17!365;UBERON:0001981!1.97e-17!60;UBERON:0007500!1.97e-17!60;UBERON:0004537!1.97e-17!60;UBERON:0006965!1.97e-17!60;UBERON:0000477!3.70e-17!286;UBERON:0004111!7.28e-17!241;UBERON:0001009!1.30e-16!113;UBERON:0000468!4.86e-16!659;UBERON:0004535!2.14e-15!110;UBERON:0000914!2.79e-14!83;UBERON:0002329!2.79e-14!83;UBERON:0003077!2.79e-14!83;UBERON:0003059!2.79e-14!83;UBERON:0007282!2.79e-14!83;UBERON:0009618!2.79e-14!83;UBERON:0007285!2.79e-14!83;UBERON:0000486!7.43e-14!82;UBERON:0000467!8.91e-14!625;UBERON:0000480!1.61e-13!626;UBERON:0003914!2.19e-13!118;UBERON:0001637!8.61e-13!42;UBERON:0003509!8.61e-13!42;UBERON:0004572!8.61e-13!42;UBERON:0004290!1.10e-12!70;UBERON:0001134!4.63e-12!61;UBERON:0002036!4.63e-12!61;UBERON:0003082!4.63e-12!61;UBERON:0003102!7.94e-12!95;UBERON:0002385!9.67e-12!63;UBERON:0001015!9.67e-12!63;UBERON:0000383!9.67e-12!63;UBERON:0000481!1.69e-11!347;UBERON:0000025!8.67e-11!194;UBERON:0004573!3.84e-10!33;UBERON:0004571!3.84e-10!33;UBERON:0005256!5.32e-10!143;UBERON:0000490!1.28e-09!138;UBERON:0007100!1.72e-09!27;UBERON:0000948!4.07e-08!24;UBERON:0005498!4.07e-08!24;UBERON:0004140!4.07e-08!24;UBERON:0009881!4.07e-08!24;UBERON:0004141!4.07e-08!24;UBERON:0003084!4.07e-08!24;UBERON:0007005!4.07e-08!24;UBERON:0004139!4.07e-08!24;UBERON:0004291!4.07e-08!24;UBERON:0003103!1.06e-07!69;UBERON:0000947!1.09e-07!21;UBERON:0010191!1.09e-07!21;UBERON:0002097!1.18e-07!40;UBERON:0002199!1.21e-07!45;UBERON:0002416!1.21e-07!45;UBERON:0000033!3.70e-07!123;UBERON:0002050!6.36e-07!605;UBERON:0005423!6.36e-07!605;UBERON:0000922!8.46e-07!612;UBERON:0000923!8.65e-07!604;UBERON:0005291!8.65e-07!604;UBERON:0006598!8.65e-07!604;UBERON:0002532!8.65e-07!604;UBERON:0000153!9.72e-07!129;UBERON:0007811!9.72e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.94e-10;42!UBERON:0003509;3.94e-10;42!UBERON:0004572;3.94e-10;42!UBERON:0004573;8.92e-10;33!UBERON:0004571;8.92e-10;33!UBERON:0000055;1.78e-09;65!UBERON:0007100;3.81e-09;25!UBERON:0007500;5.91e-09;56!UBERON:0001981;5.91e-09;56!UBERON:0004537;5.91e-09;56!UBERON:0002049;1.15e-08;75!UBERON:0007798;1.15e-08;75!UBERON:0000947;6.80e-08;21!UBERON:0010191;6.80e-08;21!UBERON:0000948;9.78e-08;22 | |||
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|phase1_expression=18.7128730648673,9.42042305120326,30.5871056888257,16.0117277365009,7.15137751083661,29.6595098194125,5.06599756336621,20.2150359496586,1.04474251279935,3.44027511102112,0,0,0,6.93091576576261,1.65698687863958,65.2155392058222,74.7341214749731,81.7947301233858,67.8226590318805,8.49535300729837,6.32402142857184,6.89600387251793,8.5870796139317,10.8130795807579,7.28147309649856,0,0,0,0,0,0.928896739896456,7.35536979583142,7.53014796945625,21.4457325896737,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,7.31420598941885,11.4019146149618,75.1831863639958,47.3485289623782,79.2113898804705,31.7213876524204,36.5831535643506,10.705967146658,21.7430079477356,13.9689520401415,18.0061310670908,13.6218238517621,8.01449634243593,5.93255108455087,0,0,0,0,0,0,12.5220316641024,19.7853956874409,17.3570250803797,12.4367747223282,48.6619346003491,16.507082516404,19.6455268544602,92.2547830234504,69.0186549612218,77.9899027741682,43.908395564897,63.1025847746365,54.4258388332418,36.7663080345869,29.9752520716251,36.7914880530409,22.0038785173646,21.6214042527979,9.19899824795299,24.6809071487714,19.9689900884144,0,0,13.5189156164186,104.861081807712,66.7342796472335,58.1276303770031,213.693282457866,33.3388279266456,24.6698144062615,32.0246987189115,79.1802830419083,27.6977821505792,31.1181652480979,22.7212045327708,4.69208025699287,5.76175924479999,3.98346434117454,13.4228833037038,16.543682824789,16.7382522218017,13.0352293494579,8.41739310714284,6.32028630160118,13.8824836453327,12.7747690004239,6.30287265172169,14.2560342873846,16.5668842616633,13.6524204290704,7.90479955997862,9.76349460933584,4.8796222750066,17.1779751600193,16.242171972591,24.8255114597206,23.2868991305225,29.3789354384454,34.9809789593281,70.4739383101273,19.9215987089988,56.1170349677832,28.9577607160013,53.5892323294909,59.1851603134456,63.6286772549574,16.2719798619202,25.7482449728997,23.1045245592171,24.085262466003,55.3814964325918,21.6617011189427,17.1256198233593,55.6591257110295,52.0945090328494,48.7567812161307,0.243947412259191,0.265059536642971,0.348581828608555,0.414644220061482,1.26160425437814,0.36497735907583,15.6449532329816,23.1566737749439,13.8134921352481,2.78620756819187,2.16563844500876,3.54920400119532,3.20310911148393,3.13314338848527,3.30881918197182,3.92182999366331,2.84724742933316,3.91010793664477,3.72820783738158,5.00171304030308,6.64339909162183,12.6217596423101,9.8777762719536,2.94017422771084,0,0,1.77236972004421,0,1.47586126251736,23.504790010898,52.8996375669575,28.1004383144049,15.4814617513911,28.4246526636686,6.84197441151682,0,18.7630744632855,16.4621175064609,28.7651300877763,37.8240093134013,37.5018265187055,39.9533719692656,0,0,0,0,0,62.8016687711406,81.6393143046457,53.4492116603797,54.7202573714403,39.5262156378988,24.1531087874083,0,0,0.829312462163088,0.144119953416961,0.37872730027914,0.63497894292169,0,0,5.13217338068116,2.36503233217644,0,1.71495859578347,4.03671903643299,1.30788020649984,4.400297149257,110.010230109869,17.8828222925941,19.441963308788,48.9326134516162,19.7614130131596,1.80045161983499,0,3.19706614819319,39.6049042433069,0.542621605391443,1.64648067356154,24.4302138220301,32.6960592843142,1.58390374586686,5.42590878707255,17.4306691720059,2.0994328148232,0,0,0,130.116296531929,60.8768259920804,27.1010119577365,23.744134293483,33.0816879306117,42.6165092510951,0,0,0,0,0.254094624222463,1.30139853857622,6.95959931499926,5.36052049069916,4.46557126157214,0,0,0,6.50264906111441,5.00170521059677,2.44138521329762,46.37750212137,34.2583658490551,40.3718182486873,63.724929756036,10.5331134904702,9.09630016223939,17.5904221197258,19.9267679560631,16.0401176631282,12.1637060255316,3.13281851940385,1.71571711905428,0,0,0.106727557803444,0,0,0.907170879989041,50.1177771793929,65.8351865405788,31.4339305765042,81.8809163743929,40.4248726762696,50.9906930025236,43.0412392690474,10.1778397909753,20.0644749603834,6.81655394914616,17.1353961630595,7.66988497835731,2.29632954224082,28.4719187830664,17.0349829531408,20.8962295659584,23.4897606728665,15.6038053801715,12.6335891614075,18.6377115792684,7.0591479225917,10.2297457257282,32.0876951834342,11.3733384070897,12.2467467799091,15.7618618754562,24.6763604304463,11.6506968143857,11.0371750248068,2.54876273045038,0.831076008928724,15.2234833211081,0,0,17.9515087581472,5.9042636225947,17.8958117065367,8.55240396676095,0,0,41.9213842737206,18.8517471350591,102.837715100262,66.2194420301036,5.39170159901255,5.37262861541453,9.37288692894808,6.44521469209642,3.91545073568417,11.5055947011736,29.7366999060103,40.3295193480787,26.7144193637498,80.2683961590934,22.1535540073654,3.253918845081,84.0548966037809,3.485186350803,83.169066647544,24.486077394583,6.08953094452551,65.2341251245798,20.0374841438788,9.67611760335135,18.6663860584048,5.90953601163857,5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| ||
|short_description=p2@CDH13 | |short_description=p2@CDH13 | ||
}} | }} |
Latest revision as of 02:18, 18 September 2015
Short description: | p2@CDH13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH13_5end |
Coexpression cluster: | C3592_Fibroblast_schwannoma_basal_salivary_mesenchymal_large_Multipotent |
Association with transcript: | -12bp_to_ENST00000268613_5end |
EntrezGene: | CDH13 |
HGNC: | 1753 |
UniProt: | P55290 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.25e-16 | 121 |
embryonic cell | 6.96e-15 | 250 |
fibroblast | 1.62e-13 | 76 |
muscle precursor cell | 4.90e-11 | 58 |
myoblast | 4.90e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.90e-11 | 58 |
muscle cell | 4.55e-10 | 55 |
smooth muscle cell | 4.76e-09 | 43 |
smooth muscle myoblast | 4.76e-09 | 43 |
vascular associated smooth muscle cell | 6.51e-09 | 32 |
endothelial cell of vascular tree | 1.46e-08 | 24 |
electrically responsive cell | 2.65e-08 | 61 |
electrically active cell | 2.65e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.42e-07 | 14 |