FFCP PHASE1:Hg19::chr19:41119846..41119862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8425 | |EntrezGene=8425 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6717 | |HGNC=6717 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_uc002oom.1_5end | |association_with_transcript=24bp_to_uc002oom.1_5end | ||
|cluster_id=chr19:41119846..41119862,+ | |||
|coexpression_cluster_id=C3791 | |coexpression_cluster_id=C3791 | ||
|description=CAGE_peak_7_at_LTBP4_5end | |description=CAGE_peak_7_at_LTBP4_5end | ||
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|ontology_enrichment_celltype=CL:0002371!6.32e-11!591;CL:0000144!6.57e-11!625;CL:0000057!2.37e-10!75;CL:0000055!6.34e-10!180;CL:0000723!3.69e-07!436;CL:0000012!4.96e-07!682;CL:0000548!6.44e-07!679;CL:0000004!6.44e-07!679;CL:0000255!6.44e-07!679;CL:0000034!7.32e-07!444;CL:0000192!9.42e-07!42;CL:0000514!9.42e-07!42 | |ontology_enrichment_celltype=CL:0002371!6.32e-11!591;CL:0000144!6.57e-11!625;CL:0000057!2.37e-10!75;CL:0000055!6.34e-10!180;CL:0000723!3.69e-07!436;CL:0000012!4.96e-07!682;CL:0000548!6.44e-07!679;CL:0000004!6.44e-07!679;CL:0000255!6.44e-07!679;CL:0000034!7.32e-07!444;CL:0000192!9.42e-07!42;CL:0000514!9.42e-07!42 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.86e-10,76;CL:0000192,8.54e-08,43;CL:0000514,8.54e-08,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!9.49e-15!95;UBERON:0001444!6.53e-09!48;UBERON:0002199!2.14e-07!45;UBERON:0002416!2.14e-07!45 | |ontology_enrichment_uberon=UBERON:0003102!9.49e-15!95;UBERON:0001444!6.53e-09!48;UBERON:0002199!2.14e-07!45;UBERON:0002416!2.14e-07!45 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.26e-17,99;UBERON:0000033,5.18e-11,56;UBERON:0001444,6.51e-10,49;UBERON:0000153,2.71e-09,62;UBERON:0007811,2.71e-09,62;UBERON:0002199,2.98e-07,46;UBERON:0002416,2.98e-07,46 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.563817616383885,0,1.78784437770915,3.48935409640147,7.59899634504932,0.631719873426831,2.87304191019822,1.72013755551056,4.88460817580699,1.74753097704138,0.791300934685361,3.34169152992126,1.32558950291166,1.34465029290355,1.20538905604795,0,0.487932798790507,1.35433163884467,2.04000691244253,0.626909442956176,0,0.410623275218653,0.376627918784408,0,0,0,2.36018566109342,4.60595277716655,1.54816123316076,5.51652734687356,6.32532429434325,8.8740962440029,0.542270404062111,0.710846162437108,0.880801318004542,2.76997704265939,2.80762226458198,0.868043482863407,0.223915474239924,0.647787332037959,0.257575567634187,0.581592955118259,0.377875943688809,0.485168122375632,0.697287110717054,0.411167888021826,0.309706370895104,0,1.2808035326455,0.236482229888585,0.689491361473237,1.93645405075148,1.35426486594342,0,0.818718450173537,0.224723484445085,0.612167784741805,0,1.27867425159808,0,0.199463657621632,0.426224750532694,0,1.13477044938228,0.622822248995575,0.502497330513487,1.5644487552606,0.434377689410233,0,0.736555271975129,0,0.211255286311942,0.637812899895131,0.209658645508376,0.112328631146495,1.05123824989054,0.32145117339416,0.285012743741249,0.79566670879636,0,0,1.09227722252426,0.889509253863555,0,0.400395987036012,0,0,0,0,1.17447437874188,0.382273228125229,1.32171328579026,2.80254281490768,0,0.393419540227666,5.10913991573914,1.23360899399706,0.334372990781356,0.977766799900771,0.473447805734733,0,0.557052284425868,1.47302953737419,0.886135578334485,1.35401931882508,0.25618263945135,1.43065282315866,0.493313713811028,1.10540007114339,0.289803085735052,0.296573126324121,0.535081656179426,0,0.453237370790265,1.14966148080576,0.34362744548263,1.01207876807801,1.59282707162048,0.651083453856419,0.950452044448374,0.451725357233318,0.639933055772092,0,1.4206635122641,1.64225599384209,5.04016858061831,10.1627274397733,1.44824403882799,0,1.34140171940727,1.2786256184353,4.69870898099936,4.01070328508712,5.21447468258965,2.3858578411533,7.78615792484217,1.03988298880475,3.1042115644759,1.40535657109002,0.72038491523742,5.46442932438813,1.85392221392215,0,0,0.132957960518865,2.62339686735876,3.43196946468077,2.97166001063652,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0.367663080345869,0,0.357198913136319,0.22452937262617,0.450445921933289,0,0,0.183201743930407,1.31780417436063,0,5.23312862571041,0.993943903390637,2.65924074495618,0.662045904066094,1.14734648299525,1.77334191099179,2.80338800071154,4.2699598291882,0.98667019366864,0.933633106199299,0.134710672069688,0.653847612453835,3.17850598054356,5.18558332031999,5.15507150034353,2.80944069147288,1.1409436430889,1.34503812496621,1.17434498643765,0.809364721840658,1.40450806702248,5.71631679513701,3.80786383666481,9.50597186817042,10.6920257155385,7.41800787835671,2.73048408581408,13.6537446945085,6.06010010234638,3.503318556415,3.60183350129438,3.5118209670467,1.22595118319608,4.35690370829131,1.58805056424029,1.97328599257748,4.48470516518992,2.11931901159562,2.40072876867522,2.37020817248409,2.31876486041066,1.48893485065272,0,0.194874010322397,2.27190396819703,3.31379635112278,10.9919318636792,2.84007674013291,1.41052937518696,1.3564847384839,4.63826047591912,4.36393792945335,2.29443676311203,0.121973706129595,0.132529768321485,0.69716365721711,0.725627385107593,0.252320850875628,0,1.56449532329816,1.92972281457866,9.66944449467364,3.25057549622385,2.88751792667834,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0,0,0.392442930250692,0.38474715694639,0,1.40241773803446,2.8810180793198,4.41026134156626,0,0,1.18157981336281,0,1.47586126251736,1.88724591328378,8.23127140564692,5.62008766288098,2.21163739305588,2.22212268380471,4.23550796903422,11.4392826380754,2.88662684050547,0.34779121492523,1.87853910777315,0,0,0,2.37061319387782,0,0.246217006087397,0.468008530278475,0.594524649154913,4.68669169933885,4.36753533317035,4.96212840348353,0.447792613514241,1.16253575405585,0.766765358330422,10.3459279958148,0.44024217006613,1.86595303986695,1.8735593944205,3.7872730027914,1.39695367442772,1.90994212779139,1.17217447210047,1.71072446022705,0.719792448923265,1.20137223137567,2.28661146104463,1.23344192779897,0.43596006883328,0.95339771567235,2.84397774667111,14.3062578340753,3.381211010224,3.72313363218819,0,2.05765899409714,1.41849132023278,2.66422179016099,6.43400971461664,2.17048642156577,4.93944202068461,1.30294473717494,4.97548728239564,3.16780749173372,0.602878754119172,1.74306691720059,1.19967589418468,0,0,2.10833939483032,2.63587341040741,4.59447743336456,0,0.144781306667579,0,0,0.448340575974109,3.34952292343276,6.46882724578552,1.79680250791648,0.508189248444927,0,0,0,0,0,0,0,2.08575535922538,4.50153468953709,1.89885516589815,1.66376689224646,1.78428988797162,1.10391690523754,0.819989904948992,1.50473049863859,6.82222512167955,3.10419213877515,0.664225598535437,2.21243002250044,1.30325421702124,4.30762546418029,2.40200396667599,1.6541442089831,0.862856803274467,1.921096040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| ||
|short_description=p7@LTBP4 | |short_description=p7@LTBP4 | ||
}} | }} |
Latest revision as of 02:36, 18 September 2015
Short description: | p7@LTBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LTBP4_5end |
Coexpression cluster: | C3791_Mesenchymal_Trabecular_Fibroblast_Prostate_Smooth_Nucleus_sacrococcigeal |
Association with transcript: | 24bp_to_uc002oom.1_5end |
EntrezGene: | LTBP4 |
HGNC: | 6717 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.86e-10 | 76 |
smooth muscle cell | 8.54e-08 | 43 |
smooth muscle myoblast | 8.54e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.26e-17 | 99 |
head | 5.18e-11 | 56 |
subdivision of head | 6.51e-10 | 49 |
anterior region of body | 2.71e-09 | 62 |
craniocervical region | 2.71e-09 | 62 |
integument | 2.98e-07 | 46 |
integumental system | 2.98e-07 | 46 |