FFCP PHASE1:Hg19::chr4:57522598..57522664,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:57522598..57522664,- to FFCP PHASE1:Hg19::chr4:57522598..57522664,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84525 | |EntrezGene=84525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24961 | |HGNC=24961 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000514890_5end | |||
|cluster_id=chr4:57522598..57522664,- | |||
|coexpression_cluster_id=C4422 | |||
|description=CAGE_peak_3_at_HOPX_5end | |||
|id=chr4:57522598..57522664,- | |||
|ontology_enrichment_celltype=CL:0000791!2.17e-09!18;CL:0000789!2.17e-09!18;CL:0002420!2.17e-09!18;CL:0002419!2.17e-09!18;CL:0000790!2.17e-09!18;CL:0000625!3.86e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000625;3.87e-11;11!CL:0000791;1.04e-10;18!CL:0000789;1.04e-10;18!CL:0002419;1.04e-10;18!CL:0000084;2.54e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,3.42e-11,11;CL:0000791,9.40e-11,18;CL:0000789,9.40e-11,18;CL:0002420,9.40e-11,18;CL:0002419,9.40e-11,18;CL:0000790,9.40e-11,18;CL:0000084,2.34e-07,25;CL:0000827,2.34e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.04e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.11e-39!115;UBERON:0001049!4.39e-25!57;UBERON:0005068!4.39e-25!57;UBERON:0006241!4.39e-25!57;UBERON:0007135!4.39e-25!57;UBERON:0002616!2.40e-22!59;UBERON:0001017!5.07e-22!82;UBERON:0005743!3.66e-21!86;UBERON:0003075!8.69e-21!86;UBERON:0007284!8.69e-21!86;UBERON:0002780!8.78e-20!41;UBERON:0001890!8.78e-20!41;UBERON:0006240!8.78e-20!41;UBERON:0002020!6.44e-19!34;UBERON:0003528!6.44e-19!34;UBERON:0003080!7.61e-19!42;UBERON:0001893!8.28e-19!34;UBERON:0002346!1.66e-18!90;UBERON:0000073!1.84e-18!94;UBERON:0001016!1.84e-18!94;UBERON:0000153!2.78e-18!129;UBERON:0007811!2.78e-18!129;UBERON:0000955!3.46e-18!69;UBERON:0006238!3.46e-18!69;UBERON:0002791!3.95e-18!33;UBERON:0001869!4.34e-18!32;UBERON:0003056!9.13e-18!61;UBERON:0000033!8.85e-17!123;UBERON:0000956!1.98e-15!25;UBERON:0000203!1.98e-15!25;UBERON:0004121!1.43e-14!169;UBERON:0002619!1.80e-13!22;UBERON:0000924!2.26e-13!173;UBERON:0006601!2.26e-13!173;UBERON:0001950!2.40e-12!20;UBERON:0000178!2.09e-08!15;UBERON:0000179!2.09e-08!15;UBERON:0000463!2.09e-08!15;UBERON:0003076!2.00e-07!15;UBERON:0003057!2.00e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.35e-19;32!UBERON:0001893;1.91e-19;34!UBERON:0003528;2.02e-19;34!UBERON:0002020;2.02e-19;34!UBERON:0000956;3.27e-19;25!UBERON:0000203;3.27e-19;25!UBERON:0002791;3.32e-19;32!UBERON:0002619;1.06e-16;22!UBERON:0002780;8.36e-16;41!UBERON:0001890;8.36e-16;41!UBERON:0000073;1.38e-15;53!UBERON:0002616;1.38e-15;53!UBERON:0001950;2.97e-15;20!UBERON:0001017;2.33e-10;75!UBERON:0007023;1.25e-09;114!UBERON:0000955;1.87e-09;68!UBERON:0000178;3.05e-09;15!UBERON:0000179;3.05e-09;15!UBERON:0000463;3.05e-09;15!UBERON:0001016;5.21e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.54e-37,114;UBERON:0001049,5.01e-29,56;UBERON:0005068,5.01e-29,56;UBERON:0006241,5.01e-29,56;UBERON:0007135,5.01e-29,56;UBERON:0000073,9.75e-27,53;UBERON:0002616,9.75e-27,53;UBERON:0001017,1.50e-24,81;UBERON:0003075,7.15e-23,82;UBERON:0007284,7.15e-23,82;UBERON:0003528,1.46e-22,34;UBERON:0002020,1.46e-22,34;UBERON:0001893,2.00e-22,34;UBERON:0002780,5.46e-22,41;UBERON:0001890,5.46e-22,41;UBERON:0003080,5.46e-22,41;UBERON:0006240,5.46e-22,41;UBERON:0001869,1.68e-21,32;UBERON:0002791,4.22e-21,32;UBERON:0002346,8.72e-21,86;UBERON:0001016,1.20e-20,89;UBERON:0000955,1.47e-20,68;UBERON:0006238,1.47e-20,68;UBERON:0003056,1.65e-19,61;UBERON:0000956,3.46e-19,25;UBERON:0000203,3.46e-19,25;UBERON:0002619,1.08e-16,22;UBERON:0001950,2.89e-15,20;UBERON:0010371,7.12e-15,104;UBERON:0004121,1.15e-13,171;UBERON:0000924,1.15e-13,171;UBERON:0006601,1.15e-13,171;UBERON:0010314,5.21e-12,132;UBERON:0011216,1.25e-10,223;UBERON:0000178,2.27e-09,15;UBERON:0000179,2.27e-09,15;UBERON:0000463,2.27e-09,15;UBERON:0003076,3.55e-08,15;UBERON:0003057,3.55e-08,15 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0.631719873426831,0,1.22866968250754,0,0.218441372130172,2.11013582582763,4.82688776544182,1.32558950291166,0,0,0,0,1.10808952269109,1.63200552995402,0.626909442956176,14.5980353436839,8.07559107930017,10.2944964467738,0,0,0,8.65401409067589,11.1310525448192,7.58599004248772,0,2.409647350226,0.369754010166788,0.232401601740905,0,25.2496377827969,3.87796785972314,1.40381113229099,6.07630438004385,1.34349284543955,1.94336199611388,1.28787783817093,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0.570025487482497,0.39783335439818,0.182664153764634,5.27988733383968,2.73069305631066,4.44754626931777,2.98711155796555,1.60158394814405,2.87376219977242,1.98313461835459,1.90810750907073,0,0.587237189370939,0,33.0428321447565,6.1655941927969,5.53106578027662,0.983548850569165,1.57204305099666,2.46721798799411,0.501559486172034,0,0,0,14.4833593950726,2.06224135232386,1.10766947291811,0.270803863765016,4.22701355094728,7.80356085359269,4.60426132890293,3.59255023121603,2.31842468588042,0.14828656316206,0,0,37.618701775592,10.3469533272519,2.74901956386104,2.02415753615602,8.91983160107471,15.626002892554,13.3063286222772,17.0149884557883,13.8225540046772,7.49584359314075,16.1008531389931,25.4549679045524,15.3221124850797,14.7092107680929,5.93780055919476,0,0,0,1.0843174571537,0.50133791063589,0,0,0.973269740605272,0.378139268656271,0.665188192387692,0.351339142772504,4.12584087817795,6.55731518926576,1.85392221392215,0,0.174129737299267,1.06366368415092,0.238490624305342,0.571994910780128,0.371457501329565,0,0,1.38856200643038,6.21838736116411,5.03399323451887,5.50236083880135,3.34391946458897,0.775250277507987,0,0.33472061276467,2.01414658554573,0,0.24406205754817,0,0,2.41109266367015,0.44905874525234,0.112611480483322,4.5994991239765,4.74632829784064,2.93122790288652,0,0,1.74437620857014,0,0,0,0,0.354668382198357,1.12135520028461,0,0,0,1.0776853765575,0.653847612453835,0,0.576175924479999,0.234321431833797,0,0,0.747243402759005,0.587172493218824,0.161872944368132,0.140450806702248,0.204154171254893,1.71968044236475,0,0,0,3.64064544775211,0,1.85169725349473,1.00094815897571,0,0.438977620880838,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.386521706326594,0,0.573609190778008,0,0,1.97529702878181,0.207322110030741,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,1.2347220339942,0,0,0,0,0,0,0.514703430895577,0.219500570817251,2.24803506515239,0.904760751704678,3.98130314181677,1.62904152655162,7.27954349695705,0,1.62302566965108,1.40890433082986,0.144366447761074,0,0,0,0,0,0.702012795417713,0,0,0.16798212819886,0,0,0,0,0,0,0.621984346622316,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,1.45770409648969,0,0.8800594298514,0,0,0.845302752556,0,0,2.31486636835928,1.41849132023278,5.86128793835419,1.00084595560703,1.62786481617433,0,0,1.42156779497018,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,1.84928690295345,0,1.45710687191585,20.8852605814043,15.0939302401662,23.7434617117535,16.0079613260152,5.20559415430487,6.95959931499926,13.0662686960792,9.56908127479745,0,0,0,1.59498939234882,1.00034104211935,0.813795071099207,0.415941723061614,0,0.157702415033935,0,4.51419149591578,56.8518760139962,1.03473071292505,0,0,0,2.34961388955289,0,4.9624326269493,3.8828556147351,6.93729125722388,0,6.65741758041988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.728364672026868,0.262248829918848,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,6.80374821106063,0.431831832204279,0,1.08378575017541,4.51520796469368,0,0,0,0,0,1.02580050046556,0,0,0.9273691048295,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0.551346289938122,0.107420244868274,0.290033387828457,0.511359764496605,0.356128142586949,1.15699440752685,0.576570202095319,0.127612712494584,1.0115778085555,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,1.2655176988749,0.38126038784765,2.81487570442467,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,1.46290121726877,0,0,0,0.141405431953713,0,0,0,0,1.15755106853338,0,0.202910376962704,0.30982349809975,0,0.286822704408103,2.75097314836739,0.35667105148125,0,0.211107635297664,0,2.27683904259429,2.0996083214699,3.65644028356946,0.670302275535787,2.17781969722645,1.03558180854457,0,0,0.443430153536676,0,6.5968189200182,7.64637207142375,3.98753031021914,4.2881719582402,8.63860773481008,4.53931317834902,5.94034580961926,11.8968776444141,0,0,0.245040215981032,0,0,0,0,8.3823336001783,30.6408592211787,42.5463901275005,0,29.4837037019132,0,0,0,18.9606791137796,0,0,0,0,0,0,0,0,0,0,0,28.6441892478125,0,0,0.293016358543788,0,0,0,2.3874448473769,3.26661148915902,2.45728561679386,13.9180670687282,6.75213198770461,0,0,0,0.996239941255349,0.828851746593443,0,0,0,0,0,0,0,5.62267412130522,9.57932369387759,0,16.4786566836187,10.4827950922892,1.996137980011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| ||
|short_description=p3@HOPX | |||
}} | }} |
Latest revision as of 02:54, 18 September 2015
Short description: | p3@HOPX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOPX_5end |
Coexpression cluster: | C4422_Osteoblast_CD4_CD34_acute_CD133_Natural_CD8 |
Association with transcript: | 0bp_to_ENST00000514890_5end |
EntrezGene: | HOPX |
HGNC: | 24961 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 3.42e-11 | 11 |
mature alpha-beta T cell | 9.40e-11 | 18 |
alpha-beta T cell | 9.40e-11 | 18 |
immature T cell | 9.40e-11 | 18 |
mature T cell | 9.40e-11 | 18 |
immature alpha-beta T cell | 9.40e-11 | 18 |
T cell | 2.34e-07 | 25 |
pro-T cell | 2.34e-07 | 25 |