FFCP PHASE1:Hg19::chr21:34143971..34143983,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:34143971..34143983,-
|short_description=p8@GCFC1
|description=CAGE_peak_8_at_GCFC1_5end
|association_with_transcript=0bp_to_ENST00000290178,ENST0000047258...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=94104 | |EntrezGene=94104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13579 | |HGNC=13579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000290178,ENST00000472588_5end | |||
|cluster_id=chr21:34143971..34143983,- | |||
|coexpression_cluster_id=C739 | |||
|description=CAGE_peak_8_at_GCFC1_5end | |||
|id=chr21:34143971..34143983,- | |||
|ontology_enrichment_celltype=CL:0000557!8.00e-18!71;CL:0002009!2.22e-16!65;CL:0000738!5.12e-16!140;CL:0000860!2.15e-15!45;CL:0002194!3.70e-15!63;CL:0000576!3.70e-15!63;CL:0000040!3.70e-15!63;CL:0000559!3.70e-15!63;CL:0000766!4.69e-15!76;CL:0002057!5.09e-15!42;CL:0000839!6.86e-15!70;CL:0002031!4.05e-14!124;CL:0002087!5.28e-14!119;CL:0000037!1.92e-13!172;CL:0000566!1.92e-13!172;CL:0000988!2.15e-12!182;CL:0000763!2.37e-11!112;CL:0000049!2.37e-11!112;CL:0002032!2.75e-11!165;CL:0000837!2.75e-11!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.33e-15;33!CL:0002057;1.33e-15;33!CL:0000473;2.60e-12;39!CL:0000234;2.60e-12;39!CL:0000576;3.28e-12;48!CL:0002032;1.60e-09;1!CL:0000557;1.60e-09;1!CL:0000766;6.26e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.57e-20,42;CL:0002057,3.57e-20,42;CL:0000473,2.02e-17,48;CL:0000234,2.02e-17,48;CL:0000557,3.59e-14,67;CL:0002194,1.44e-13,59;CL:0000576,1.44e-13,59;CL:0000040,1.44e-13,59;CL:0000559,1.44e-13,59;CL:0002009,4.53e-13,61;CL:0000839,5.88e-12,66;CL:0000766,8.02e-11,72;CL:0000763,1.30e-09,108;CL:0000049,1.30e-09,108;CL:0000988,4.15e-08,177;CL:0000037,1.70e-07,168;CL:0002087,2.27e-07,115;CL:0000738,4.09e-07,136;CL:0002031,5.56e-07,120;CL:0002032,9.56e-07,161;CL:0000837,9.56e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.33e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.11e-19!102;UBERON:0003061!5.11e-19!102;UBERON:0002193!3.70e-16!112;UBERON:0001474!5.16e-16!86;UBERON:0002371!1.56e-15!80;UBERON:0004765!3.63e-13!101;UBERON:0001434!3.63e-13!101;UBERON:0002405!5.11e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.14e-12,98;UBERON:0003061,1.14e-12,98;UBERON:0002371,2.86e-12,76;UBERON:0002193,2.83e-11,108;UBERON:0001474,3.13e-11,82;UBERON:0004765,4.64e-10,90;UBERON:0002405,1.13e-09,93;UBERON:0001434,7.40e-09,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0.229240217243854,0.0821005894499457,0.0787107813136792,0.393364276848904,0.767658796194425,0.619264493264304,0,0,0,0.232401601740905,0.142169232487422,0,0.553995408531877,0.601633342410425,1.08505435357926,0.671746422719773,0.32389366601898,0.515151135268373,0.436194716338694,0.377875943688809,0.727752183563449,0.464858073811369,1.6446715520873,1.23882548358041,0,0.256160706529101,0.945928919554341,0,1.93645405075148,1.35426486594342,0.188242339542605,1.36453075028923,0.449446968890169,0.612167784741805,0.641858054152187,1.27867425159808,0.329851300186716,0.598390972864896,0.426224750532694,0.290209238628584,0,1.86846674698672,1.00499466102697,1.5644487552606,0.217188844705117,0,0.368277635987565,0.632924774881769,0.422510572623884,0,0.209658645508376,0.673971786878971,0,0,1.14005097496499,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,2.64342657158052,1.12101712596307,0,0.590129310341499,0.786021525498329,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0.289803085735052,0.14828656316206,0,1.04535523804977,0,0.383220493601921,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0,0,0.403213486449465,0,1.01377082717959,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.458426764241994,0,0,0.649094787309367,0.348259474598534,0.26591592103773,0.715471872916026,2.85997455390064,0.74291500265913,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0.358121926479791,0.336255431980582,0.591092280605782,0.215627574859517,0.385029108839245,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0.431428401637234,0.533637789017222,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232420756919918,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0.144269212976445,0.213425530045242,0,0,0,0.635020748171649,0,0.280797178113459,0.456469358066384,0.313359791546046,2.50634477090067,0,0,0,0,0,0,0,0.500547425135725,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0,0,0.296964680832639,0,0,0.281338832821026,0.222617410045812,0,0,0,0,0,0,0.246169610922139,0,0,0.179021174675609,0.511572370226872,0,2.3948309234694,0,0,0.185536196323703,0,0.260427761085233,0.174919999992391,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.995213339381022,0,0.219385397153973,0,0.139423744278603,0.230850775511391,0.227884111694002,0.23056390438806,0.179515288819544,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0.332423363800313,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,1.18608451472249,0.123563938946503,0.104421949505455,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0.30607276163049,0,7.21552413189564,0.311064574191741,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.0870592065804026,0,0,0.0967563312890851,0.292357268344742,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0.391102765469606,0.0801588202515337,0.213452994739353,0,0.288180834308212,0,0.171594997861965,0,0,0,0.135904206073614,0.523014231561666,0.203996435272644,0,0.600420288709789,0.410716136675979,19.1619882100458,0,0.262887354279314,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,0.408610218334727,0.160753148465019,0,0.415440338029185,0.674921674654501,0.77380195455795,0.121499113316049,0,0.157611414598396,0.209818352539992,0,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0.170388021785422,0,0.146552233678082,0,0.258565912723101,0.26446520348538,0.684347351537318,0,0.106787412567695,0,0,0,0.395223263795889,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| ||
|short_description=p8@GCFC1 | |||
}} | }} |
Latest revision as of 03:33, 18 September 2015
Short description: | p8@GCFC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GCFC1_5end |
Coexpression cluster: | C739_granulocyte_CD34_CD19_CD14CD16_CD4_Mesothelial_Dendritic |
Association with transcript: | 0bp_to_ENST00000290178, ENST00000472588_5end |
EntrezGene: | GCFC1 |
HGNC: | 13579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.57e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.57e-20 | 42 |
defensive cell | 2.02e-17 | 48 |
phagocyte | 2.02e-17 | 48 |
granulocyte monocyte progenitor cell | 3.59e-14 | 67 |
monopoietic cell | 1.44e-13 | 59 |
monocyte | 1.44e-13 | 59 |
monoblast | 1.44e-13 | 59 |
promonocyte | 1.44e-13 | 59 |
macrophage dendritic cell progenitor | 4.53e-13 | 61 |
myeloid lineage restricted progenitor cell | 5.88e-12 | 66 |
myeloid leukocyte | 8.02e-11 | 72 |
myeloid cell | 1.30e-09 | 108 |
common myeloid progenitor | 1.30e-09 | 108 |
hematopoietic cell | 4.15e-08 | 177 |
hematopoietic stem cell | 1.70e-07 | 168 |
nongranular leukocyte | 2.27e-07 | 115 |
leukocyte | 4.09e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 5.56e-07 | 120 |
hematopoietic oligopotent progenitor cell | 9.56e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.56e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.14e-12 | 98 |
blood island | 1.14e-12 | 98 |
bone marrow | 2.86e-12 | 76 |
hemolymphoid system | 2.83e-11 | 108 |
bone element | 3.13e-11 | 82 |
skeletal element | 4.64e-10 | 90 |
immune system | 1.13e-09 | 93 |
skeletal system | 7.40e-09 | 100 |