FFCP PHASE1:Hg19::chr6:32812358..32812369,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:32812358..32812369,-
|short_description=p8@PSMB8
|description=CAGE_peak_8_at_PSMB8_5end
|association_with_transcript=58bp_to_ENST00000484003_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5696 | |EntrezGene=5696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9545 | |HGNC=9545 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=58bp_to_ENST00000484003_5end | |||
|cluster_id=chr6:32812358..32812369,- | |||
|description=CAGE_peak_8_at_PSMB8_5end | |||
|id=chr6:32812358..32812369,- | |||
|ontology_enrichment_celltype=CL:0000738!7.72e-22!140;CL:0002087!1.63e-21!119;CL:0000542!1.48e-18!53;CL:0000051!1.48e-18!53;CL:0000838!2.53e-18!52;CL:0002031!8.56e-17!124;CL:0000037!5.82e-14!172;CL:0000566!5.82e-14!172;CL:0000988!8.56e-14!182;CL:0002032!1.85e-12!165;CL:0000837!1.85e-12!165;CL:0000084!1.28e-10!25;CL:0000827!1.28e-10!25;CL:0000791!2.59e-08!18;CL:0000789!2.59e-08!18;CL:0002420!2.59e-08!18;CL:0002419!2.59e-08!18;CL:0000790!2.59e-08!18;CL:0000860!3.01e-08!45;CL:0000945!3.07e-07!24;CL:0000826!3.07e-07!24;CL:0002057!7.16e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.61e-11;25!CL:0000542;5.11e-10;53!CL:0000791;2.98e-09;18!CL:0000789;2.98e-09;18!CL:0002419;2.98e-09;18!CL:0000094;3.16e-08;8!CL:0000081;3.19e-08;11!CL:0000623;6.50e-08;3!CL:0002087;2.15e-07;104!CL:0000625;2.32e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.58e-21,136;CL:0000838,2.57e-20,52;CL:0000542,8.36e-20,53;CL:0000051,8.36e-20,53;CL:0002087,1.51e-19,115;CL:0002031,4.14e-17,120;CL:0000988,1.30e-16,177;CL:0002032,3.23e-16,161;CL:0000837,3.23e-16,161;CL:0000037,4.71e-16,168;CL:0000084,2.71e-11,25;CL:0000827,2.71e-11,25;CL:0000791,1.21e-09,18;CL:0000789,1.21e-09,18;CL:0002420,1.21e-09,18;CL:0002419,1.21e-09,18;CL:0000790,1.21e-09,18;CL:0000094,2.02e-08,8;CL:0000081,2.42e-08,11;CL:0000623,2.85e-08,3;CL:0000825,2.85e-08,3;CL:0000625,1.17e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;5.11e-10;53!CL:0000790;2.98e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.38e-07!102;UBERON:0003061!2.38e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.47e-09;15!UBERON:0000179;6.47e-09;15!UBERON:0000463;6.47e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.06e-08,15;UBERON:0000179,1.06e-08,15;UBERON:0000463,1.06e-08,15 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.251085279189606,1.22261449196722,2.21671591514854,2.44003422072406,1.96682138424452,0.767658796194425,0.309632246632152,0,0.6024118375565,0,0.154934401160603,0.426507697462265,0,1.10799081706375,1.80490002723128,1.08505435357926,0,0,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,2.01384674625505,2.81776777182011,2.60130452877444,0,0,0,0,0.272906150057846,0.224723484445085,1.22433556948361,0.962787081228281,0,1.64925650093358,1.19678194572979,2.55734850319616,0.870627715885752,0.56738522469114,0.622822248995575,1.00499466102697,1.0429658368404,2.38907729175628,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0.450530678524519,0.32145117339416,0,0.19891667719909,0.365328307529268,0,1.63841583378639,1.77901850772711,1.28019066769952,0.800791974072025,0,0.661044872784862,0,0.569212969109448,1.76171156811282,1.14681968437569,0,0,0.263384084775077,0.590129310341499,2.35806457649499,1.43921049299656,1.00311897234407,0.651844533267181,0.946895611469467,3.89653456815823,0.779873198196215,1.76763544484902,2.21533894583621,2.70803863765016,1.0247305578054,1.04047478047903,0.164437904603676,0.276350017785848,0.289803085735052,0.296573126324121,1.07016331235885,0,0.793165398882963,0.383220493601921,1.37450978193052,1.51811815211702,0.95569624297229,0.651083453856419,0.950452044448374,1.35517607169996,1.91979916731628,0,1.18388626022008,0,1.81446068902259,2.40696176205157,2.75166367377318,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0.175669571386252,0.261958150995425,0,0,0,0.174129737299267,0.26591592103773,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0.516833518338658,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,7.9068250461638,3.87780264148325,0,0.496971951695318,0.12663051166458,0,0,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0.211931901159562,0.600182192168805,0.206105058476878,0,0,0,0.0974370051611986,0.504867548488229,0,0,0,0.403008392910561,0,0,0.272746120590835,0,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0.928735856063958,0.721879481669586,0.354920400119532,0.337169380156203,0.241011029883482,0.55146986366197,0.435758888184812,0.474541238222193,0.404493924480493,0.196221465125346,0.38474715694639,0,2.80483547606892,0,0,0,0.982827216677626,1.18157981336281,0.882926198829301,0,0.171567810298526,0,0,0.904760751704678,0,0,2.07986957055916,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.503946384596579,0.283550194484773,0.179117045405697,0,0.383382679165211,0.492663237895943,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.87192013766656,0,0.129271715757778,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0.602878754119172,0,0.699810938274399,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.448340575974109,1.97030760201927,1.50939302401662,2.18183161675572,0.254094624222463,0,0,0,0,3.74503511973591,0,2.48649308061621,0,0,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0.620304078368662,1.2942852049117,0.533637789017222,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.34444334449382,0.364182336013434,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.328014645699706,0,0.412164046590889,0.183138929636687,0.082509499920588,0,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0,0,0.255679882248303,0.267096106940212,0,0,0.255225424989168,0,0,0.31481234683064,0,1.54016790088044,1.06461206063404,0,0,0,0.744316738719335,0,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0,0,0.731140468893853,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.608731130888112,0.6196469961995,0.563391205064483,0,0,0,0,0.844430541190656,0,0,0,0.384888450902048,0,1.08890984861323,0.188287601553558,0,0,0,0,1.01489521846434,0.764637207142375,1.70894156152249,0,0,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0.980160863924127,0.371606350251437,0.721346064882224,0.142283686696828,1.11598390910176,1.1974762285969,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0.37428108081644,0,0,0.334330152832435,1.98895302764489,0,0,0,0,0,0.445234820091624,0.988823245360557,0,0,0,1.0077309914171,0.409074730008619,0.492339221844278,0,0.179736702294654,0.358042349351218,0,0,2.3948309234694,0,0,0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| ||
|short_description=p8@PSMB8 | |||
}} | }} |
Latest revision as of 04:11, 18 September 2015
Short description: | p8@PSMB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PSMB8_5end |
Coexpression cluster: | NA |
Association with transcript: | 58bp_to_ENST00000484003_5end |
EntrezGene: | PSMB8 |
HGNC: | 9545 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.58e-21 | 136 |
lymphoid lineage restricted progenitor cell | 2.57e-20 | 52 |
lymphocyte | 8.36e-20 | 53 |
common lymphoid progenitor | 8.36e-20 | 53 |
nongranular leukocyte | 1.51e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 4.14e-17 | 120 |
hematopoietic cell | 1.30e-16 | 177 |
hematopoietic oligopotent progenitor cell | 3.23e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.23e-16 | 161 |
hematopoietic stem cell | 4.71e-16 | 168 |
T cell | 2.71e-11 | 25 |
pro-T cell | 2.71e-11 | 25 |
mature alpha-beta T cell | 1.21e-09 | 18 |
alpha-beta T cell | 1.21e-09 | 18 |
immature T cell | 1.21e-09 | 18 |
mature T cell | 1.21e-09 | 18 |
immature alpha-beta T cell | 1.21e-09 | 18 |
granulocyte | 2.02e-08 | 8 |
blood cell | 2.42e-08 | 11 |
natural killer cell | 2.85e-08 | 3 |
pro-NK cell | 2.85e-08 | 3 |
CD8-positive, alpha-beta T cell | 1.17e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 1.06e-08 | 15 |
haemolymphatic fluid | 1.06e-08 | 15 |
organism substance | 1.06e-08 | 15 |