FFCP PHASE1:Hg19::chr11:47290914..47290939,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8567 | |EntrezGene=8567 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6766 | |HGNC=6766 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WXG6 | |UniProt=Q8WXG6 | ||
|association_with_transcript=0bp_to_ENST00000342922,NM_130470,uc001neq.2_5end | |association_with_transcript=0bp_to_ENST00000342922,NM_130470,uc001neq.2_5end | ||
|cluster_id=chr11:47290914..47290939,+ | |||
|description=CAGE_peak_3_at_MADD_5end | |description=CAGE_peak_3_at_MADD_5end | ||
|id=chr11:47290914..47290939,+ | |id=chr11:47290914..47290939,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.09e-26!172;CL:0000566!1.09e-26!172;CL:0000988!3.70e-24!182;CL:0002032!4.94e-24!165;CL:0000837!4.94e-24!165;CL:0000763!2.60e-22!112;CL:0000049!2.60e-22!112;CL:0000557!5.72e-22!71;CL:0000738!2.37e-21!140;CL:0002087!3.15e-21!119;CL:0000860!2.15e-20!45;CL:0002009!4.61e-20!65;CL:0002194!5.71e-20!63;CL:0000576!5.71e-20!63;CL:0000040!5.71e-20!63;CL:0000559!5.71e-20!63;CL:0002031!9.20e-20!124;CL:0000766!1.14e-19!76;CL:0002057!1.54e-19!42;CL:0000839!3.29e-19!70 | |ontology_enrichment_celltype=CL:0000037!1.09e-26!172;CL:0000566!1.09e-26!172;CL:0000988!3.70e-24!182;CL:0002032!4.94e-24!165;CL:0000837!4.94e-24!165;CL:0000763!2.60e-22!112;CL:0000049!2.60e-22!112;CL:0000557!5.72e-22!71;CL:0000738!2.37e-21!140;CL:0002087!3.15e-21!119;CL:0000860!2.15e-20!45;CL:0002009!4.61e-20!65;CL:0002194!5.71e-20!63;CL:0000576!5.71e-20!63;CL:0000040!5.71e-20!63;CL:0000559!5.71e-20!63;CL:0002031!9.20e-20!124;CL:0000766!1.14e-19!76;CL:0002057!1.54e-19!42;CL:0000839!3.29e-19!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.46e-15;33!CL:0002057;9.46e-15;33!CL:0000576;2.28e-14;48!CL:0000473;2.05e-11;39!CL:0000234;2.05e-11;39!CL:0000766;7.05e-10;69!CL:0000763;9.10e-09;100!CL:0002087;9.82e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.67e-27,168;CL:0000988,6.37e-25,177;CL:0002032,1.08e-24,161;CL:0000837,1.08e-24,161;CL:0000763,1.54e-23,108;CL:0000049,1.54e-23,108;CL:0000557,2.37e-23,67;CL:0002087,9.83e-22,115;CL:0000738,1.11e-21,136;CL:0002009,2.20e-21,61;CL:0002194,2.64e-21,59;CL:0000576,2.64e-21,59;CL:0000040,2.64e-21,59;CL:0000559,2.64e-21,59;CL:0000766,4.17e-21,72;CL:0000839,6.76e-21,66;CL:0000860,8.95e-21,42;CL:0002057,8.95e-21,42;CL:0002031,1.47e-20,120;CL:0000473,5.02e-19,48;CL:0000234,5.02e-19,48 | |||
|ontology_enrichment_development_v019=CL:0002057;5.48e-15;42!CL:0000049;5.01e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.73e-20!102;UBERON:0003061!3.73e-20!102;UBERON:0002193!2.52e-19!112;UBERON:0002371!2.65e-16!80;UBERON:0001474!1.39e-14!86;UBERON:0002405!4.37e-12!115;UBERON:0001893!1.35e-09!34;UBERON:0007023!2.03e-09!115;UBERON:0004765!2.41e-09!101;UBERON:0001434!2.41e-09!101;UBERON:0002020!2.48e-09!34;UBERON:0003528!2.48e-09!34;UBERON:0002791!2.87e-09!33;UBERON:0001869!4.86e-09!32;UBERON:0002780!1.40e-08!41;UBERON:0001890!1.40e-08!41;UBERON:0006240!1.40e-08!41;UBERON:0002619!2.93e-08!22;UBERON:0001950!3.13e-08!20;UBERON:0003080!7.66e-08!42;UBERON:0001049!8.84e-08!57;UBERON:0005068!8.84e-08!57;UBERON:0006241!8.84e-08!57;UBERON:0007135!8.84e-08!57;UBERON:0000073!2.29e-07!94;UBERON:0001016!2.29e-07!94;UBERON:0000956!2.42e-07!25;UBERON:0000203!2.42e-07!25;UBERON:0005743!3.66e-07!86;UBERON:0001017!4.15e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.30e-09;32!UBERON:0001893;8.57e-09;34!UBERON:0002791;1.21e-08;32!UBERON:0003528;1.28e-08;34!UBERON:0002020;1.28e-08;34!UBERON:0001950;1.54e-08;20!UBERON:0002619;1.80e-08;22!UBERON:0000956;1.03e-07;25!UBERON:0000203;1.03e-07;25!UBERON:0002780;8.20e-07;41!UBERON:0001890;8.20e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.84e-21,98;UBERON:0003061,1.84e-21,98;UBERON:0002193,4.75e-20,108;UBERON:0002405,4.72e-18,93;UBERON:0002371,7.64e-18,76;UBERON:0001474,1.22e-15,82;UBERON:0004765,8.20e-12,90;UBERON:0001893,3.77e-10,34;UBERON:0007023,5.72e-10,114;UBERON:0003528,7.25e-10,34;UBERON:0002020,7.25e-10,34;UBERON:0001869,1.49e-09,32;UBERON:0002791,1.71e-09,32;UBERON:0002780,4.99e-09,41;UBERON:0001890,4.99e-09,41;UBERON:0003080,4.99e-09,41;UBERON:0006240,4.99e-09,41;UBERON:0001049,6.48e-09,56;UBERON:0005068,6.48e-09,56;UBERON:0006241,6.48e-09,56;UBERON:0007135,6.48e-09,56;UBERON:0000073,7.10e-09,53;UBERON:0002616,7.10e-09,53;UBERON:0001434,7.74e-09,100;UBERON:0002619,1.02e-08,22;UBERON:0001950,1.09e-08,20;UBERON:0001016,2.85e-08,89;UBERON:0001017,6.15e-08,81;UBERON:0000956,9.67e-08,25;UBERON:0000203,9.67e-08,25 | |||
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| ||
|short_description=p3@MADD | |short_description=p3@MADD | ||
}} | }} |
Latest revision as of 04:17, 18 September 2015
Short description: | p3@MADD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MADD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000342922, NM_130470, uc001neq.2_5end |
EntrezGene: | MADD |
HGNC: | 6766 |
UniProt: | Q8WXG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.67e-27 | 168 |
hematopoietic cell | 6.37e-25 | 177 |
hematopoietic oligopotent progenitor cell | 1.08e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-24 | 161 |
myeloid cell | 1.54e-23 | 108 |
common myeloid progenitor | 1.54e-23 | 108 |
granulocyte monocyte progenitor cell | 2.37e-23 | 67 |
nongranular leukocyte | 9.83e-22 | 115 |
leukocyte | 1.11e-21 | 136 |
macrophage dendritic cell progenitor | 2.20e-21 | 61 |
monopoietic cell | 2.64e-21 | 59 |
monocyte | 2.64e-21 | 59 |
monoblast | 2.64e-21 | 59 |
promonocyte | 2.64e-21 | 59 |
myeloid leukocyte | 4.17e-21 | 72 |
myeloid lineage restricted progenitor cell | 6.76e-21 | 66 |
classical monocyte | 8.95e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.95e-21 | 42 |
hematopoietic lineage restricted progenitor cell | 1.47e-20 | 120 |
defensive cell | 5.02e-19 | 48 |
phagocyte | 5.02e-19 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.84e-21 | 98 |
blood island | 1.84e-21 | 98 |
hemolymphoid system | 4.75e-20 | 108 |
immune system | 4.72e-18 | 93 |
bone marrow | 7.64e-18 | 76 |
bone element | 1.22e-15 | 82 |
skeletal element | 8.20e-12 | 90 |
telencephalon | 3.77e-10 | 34 |
adult organism | 5.72e-10 | 114 |
brain grey matter | 7.25e-10 | 34 |
gray matter | 7.25e-10 | 34 |
cerebral hemisphere | 1.49e-09 | 32 |
regional part of telencephalon | 1.71e-09 | 32 |
regional part of forebrain | 4.99e-09 | 41 |
forebrain | 4.99e-09 | 41 |
anterior neural tube | 4.99e-09 | 41 |
future forebrain | 4.99e-09 | 41 |
neural tube | 6.48e-09 | 56 |
neural rod | 6.48e-09 | 56 |
future spinal cord | 6.48e-09 | 56 |
neural keel | 6.48e-09 | 56 |
regional part of nervous system | 7.10e-09 | 53 |
regional part of brain | 7.10e-09 | 53 |
skeletal system | 7.74e-09 | 100 |
regional part of cerebral cortex | 1.02e-08 | 22 |
neocortex | 1.09e-08 | 20 |
nervous system | 2.85e-08 | 89 |
central nervous system | 6.15e-08 | 81 |
cerebral cortex | 9.67e-08 | 25 |
pallium | 9.67e-08 | 25 |