FFCP PHASE1:Hg19::chr2:172543967..172544004,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1781 | |EntrezGene=1781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2964 | |HGNC=2964 | ||
|TSSclassifier=strong | |||
|UniProt=Q13409,B7ZA04,E7EMU4,F8W8S0 | |UniProt=Q13409,B7ZA04,E7EMU4,F8W8S0 | ||
|association_with_transcript=0bp_to_ENST00000263811,ENST00000397119,ENST00000410079,ENST00000438879,ENST00000471482,ENST00000534253,NM_001378,uc002uha.1,uc002uhb.1,uc002uhc.2,uc010zds.1_5end | |association_with_transcript=0bp_to_ENST00000263811,ENST00000397119,ENST00000410079,ENST00000438879,ENST00000471482,ENST00000534253,NM_001378,uc002uha.1,uc002uhb.1,uc002uhc.2,uc010zds.1_5end | ||
|cluster_id=chr2:172543967..172544004,+ | |||
|description=CAGE_peak_2_at_DYNC1I2_5end | |description=CAGE_peak_2_at_DYNC1I2_5end | ||
|id=chr2:172543967..172544004,+ | |id=chr2:172543967..172544004,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.26e-10!82;UBERON:0000073!1.62e-10!94;UBERON:0001016!1.62e-10!94;UBERON:0000924!9.83e-10!173;UBERON:0006601!9.83e-10!173;UBERON:0005743!2.02e-09!86;UBERON:0004121!3.45e-09!169;UBERON:0001049!7.11e-09!57;UBERON:0005068!7.11e-09!57;UBERON:0006241!7.11e-09!57;UBERON:0007135!7.11e-09!57;UBERON:0000955!4.82e-08!69;UBERON:0006238!4.82e-08!69;UBERON:0002780!7.00e-08!41;UBERON:0001890!7.00e-08!41;UBERON:0006240!7.00e-08!41;UBERON:0003080!9.18e-08!42;UBERON:0002616!2.17e-07!59;UBERON:0000475!2.32e-07!365;UBERON:0000468!3.31e-07!659;UBERON:0000033!4.61e-07!123 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.11e-12,89;UBERON:0001017,1.05e-10,81;UBERON:0004121,3.68e-09,171;UBERON:0000924,3.68e-09,171;UBERON:0006601,3.68e-09,171;UBERON:0001049,5.67e-09,56;UBERON:0005068,5.67e-09,56;UBERON:0006241,5.67e-09,56;UBERON:0007135,5.67e-09,56;UBERON:0000955,4.13e-08,68;UBERON:0006238,4.13e-08,68;UBERON:0002780,7.00e-08,41;UBERON:0001890,7.00e-08,41;UBERON:0003080,7.00e-08,41;UBERON:0006240,7.00e-08,41;UBERON:0000073,7.82e-08,53;UBERON:0002616,7.82e-08,53;UBERON:0011216,4.33e-07,223;UBERON:0010371,8.97e-07,104 | |||
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| ||
|short_description=p2@DYNC1I2 | |short_description=p2@DYNC1I2 | ||
}} | }} |
Latest revision as of 04:32, 18 September 2015
Short description: | p2@DYNC1I2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DYNC1I2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000263811, ENST00000397119, ENST00000410079, ENST00000438879, ENST00000471482, ENST00000534253, NM_001378, uc002uha.1, uc002uhb.1, uc002uhc.2, uc010zds.1_5end |
EntrezGene: | DYNC1I2 |
HGNC: | 2964 |
UniProt: | Q13409B7ZA04E7EMU4F8W8S0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 8.11e-12 | 89 |
central nervous system | 1.05e-10 | 81 |
ectoderm-derived structure | 3.68e-09 | 171 |
ectoderm | 3.68e-09 | 171 |
presumptive ectoderm | 3.68e-09 | 171 |
neural tube | 5.67e-09 | 56 |
neural rod | 5.67e-09 | 56 |
future spinal cord | 5.67e-09 | 56 |
neural keel | 5.67e-09 | 56 |
brain | 4.13e-08 | 68 |
future brain | 4.13e-08 | 68 |
regional part of forebrain | 7.00e-08 | 41 |
forebrain | 7.00e-08 | 41 |
anterior neural tube | 7.00e-08 | 41 |
future forebrain | 7.00e-08 | 41 |
regional part of nervous system | 7.82e-08 | 53 |
regional part of brain | 7.82e-08 | 53 |
organ system subdivision | 4.33e-07 | 223 |
ecto-epithelium | 8.97e-07 | 104 |