FFCP PHASE1:Hg19::chr4:6565315..6565327,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5522 | |EntrezGene=5522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9306 | |HGNC=9306 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z3Y1 | |UniProt=B7Z3Y1 | ||
|association_with_transcript=0bp_to_ENST00000506140,NM_001206994,uc011bwe.1_5end | |association_with_transcript=0bp_to_ENST00000506140,NM_001206994,uc011bwe.1_5end | ||
|cluster_id=chr4:6565315..6565327,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_16_at_PPP2R2C_5end | |description=CAGE_peak_16_at_PPP2R2C_5end | ||
|id=chr4:6565315..6565327,- | |id=chr4:6565315..6565327,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.08e-31;2!UBERON:0006222;5.52e-17;1!UBERON:0006601;5.25e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!3.74e-56!34;UBERON:0001869!4.02e-55!32;UBERON:0002780!2.95e-54!41;UBERON:0001890!2.95e-54!41;UBERON:0006240!2.95e-54!41;UBERON:0002791!5.51e-53!33;UBERON:0003080!7.81e-53!42;UBERON:0002020!2.76e-51!34;UBERON:0003528!2.76e-51!34;UBERON:0001049!3.73e-47!57;UBERON:0005068!3.73e-47!57;UBERON:0006241!3.73e-47!57;UBERON:0007135!3.73e-47!57;UBERON:0002616!2.49e-45!59;UBERON:0000955!2.78e-43!69;UBERON:0006238!2.78e-43!69;UBERON:0002619!4.85e-43!22;UBERON:0001017!4.57e-38!82;UBERON:0000956!1.44e-37!25;UBERON:0000203!1.44e-37!25;UBERON:0001950!9.68e-37!20;UBERON:0005743!5.79e-36!86;UBERON:0003056!1.55e-34!61;UBERON:0000073!7.24e-32!94;UBERON:0001016!7.24e-32!94;UBERON:0003075!2.43e-31!86;UBERON:0007284!2.43e-31!86;UBERON:0007023!2.64e-31!115;UBERON:0002346!1.27e-29!90;UBERON:0000033!7.49e-23!123;UBERON:0001871!4.03e-22!7;UBERON:0000153!1.95e-21!129;UBERON:0007811!1.95e-21!129;UBERON:0002420!3.15e-20!9;UBERON:0007245!3.15e-20!9;UBERON:0010009!3.15e-20!9;UBERON:0010011!3.15e-20!9;UBERON:0000454!3.15e-20!9;UBERON:0000349!9.60e-19!5;UBERON:0004121!6.38e-17!169;UBERON:0000369!1.56e-16!4;UBERON:0002435!1.56e-16!4;UBERON:0000204!1.56e-16!4;UBERON:0010082!1.56e-16!4;UBERON:0000924!2.39e-16!173;UBERON:0006601!2.39e-16!173;UBERON:0000200!1.02e-15!6;UBERON:0002308!6.57e-15!9;UBERON:0000125!6.57e-15!9;UBERON:0009663!4.97e-14!7;UBERON:0005383!8.48e-13!3;UBERON:0005382!8.48e-13!3;UBERON:0002771!6.04e-12!3;UBERON:0000064!3.77e-11!219;UBERON:0000475!1.48e-09!365;UBERON:0001873!3.64e-09!2;UBERON:0010122!3.64e-09!2;UBERON:0000025!5.88e-09!194;UBERON:0000483!6.06e-09!309;UBERON:0000119!8.97e-09!312;UBERON:0001954!1.87e-08!2;UBERON:0003022!1.87e-08!2;UBERON:0002421!1.87e-08!2;UBERON:0002600!1.87e-08!2;UBERON:0001876!2.91e-08!2;UBERON:0001872!2.57e-07!5;UBERON:0002021!3.79e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.66e-61;4!UBERON:0002435;1.66e-61;4!UBERON:0000204;1.66e-61;4!UBERON:0005383;2.24e-46;3!UBERON:0005382;2.24e-46;3!UBERON:0009663;2.15e-35;7!UBERON:0001873;1.08e-31;2!UBERON:0002791;3.30e-28;32!UBERON:0002420;1.22e-27;9!UBERON:0000125;1.22e-27;9!UBERON:0007245;1.22e-27;9!UBERON:0002308;1.22e-27;9!UBERON:0010009;1.22e-27;9!UBERON:0010011;1.22e-27;9!UBERON:0000454;1.22e-27;9!UBERON:0003528;7.78e-27;34!UBERON:0002020;7.78e-27;34!UBERON:0001893;1.17e-25;34!UBERON:0001869;2.32e-25;32!UBERON:0002780;1.12e-21;41!UBERON:0001890;1.12e-21;41!UBERON:0001882;5.52e-17;1!UBERON:0005403;5.52e-17;1!UBERON:0002022;1.53e-16;1!UBERON:0001874;1.53e-16;1!UBERON:0001017;1.59e-15;75!UBERON:0000955;5.51e-15;68!UBERON:0000073;3.20e-13;53!UBERON:0002616;3.20e-13;53!UBERON:0007023;2.22e-12;114!UBERON:0001950;6.75e-12;20!UBERON:0002619;6.88e-11;22!UBERON:0001016;3.28e-10;83!UBERON:0000956;1.15e-09;25!UBERON:0000203;1.15e-09;25!UBERON:0002360;6.17e-09;2!UBERON:0000094;6.17e-09;2!UBERON:0010743;6.17e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,8.93e-62,4;UBERON:0002435,8.93e-62,4;UBERON:0000204,8.93e-62,4;UBERON:0010082,8.93e-62,4;UBERON:0005383,1.21e-46,3;UBERON:0005382,1.21e-46,3;UBERON:0009663,1.51e-35,7;UBERON:0001873,5.37e-32,2;UBERON:0010122,5.37e-32,2;UBERON:0002791,5.52e-29,32;UBERON:0001869,5.52e-29,32;UBERON:0002780,1.02e-28,41;UBERON:0001890,1.02e-28,41;UBERON:0003080,1.02e-28,41;UBERON:0006240,1.02e-28,41;UBERON:0002420,9.31e-28,9;UBERON:0000125,9.31e-28,9;UBERON:0007245,9.31e-28,9;UBERON:0002308,9.31e-28,9;UBERON:0010009,9.31e-28,9;UBERON:0010011,9.31e-28,9;UBERON:0000454,9.31e-28,9;UBERON:0003528,2.66e-27,34;UBERON:0002020,2.66e-27,34;UBERON:0001893,2.66e-27,34;UBERON:0001017,1.81e-25,81;UBERON:0000955,1.97e-25,68;UBERON:0006238,1.97e-25,68;UBERON:0001016,6.94e-23,89;UBERON:0000073,3.45e-22,53;UBERON:0002616,3.45e-22,53;UBERON:0001049,5.51e-21,56;UBERON:0005068,5.51e-21,56;UBERON:0006241,5.51e-21,56;UBERON:0007135,5.51e-21,56;UBERON:0003056,3.09e-19,61;UBERON:0007023,2.81e-18,114;UBERON:0001882,5.53e-17,1;UBERON:0005403,5.53e-17,1;UBERON:0002022,1.04e-16,1;UBERON:0001874,1.65e-16,1;UBERON:0003075,3.52e-14,82;UBERON:0007284,3.52e-14,82;UBERON:0002346,1.72e-13,86;UBERON:0001950,7.15e-12,20;UBERON:0004121,1.34e-11,171;UBERON:0000924,1.34e-11,171;UBERON:0006601,1.34e-11,171;UBERON:0010371,4.87e-11,104;UBERON:0002619,7.25e-11,22;UBERON:0000956,1.21e-09,25;UBERON:0000203,1.21e-09,25;UBERON:0002360,5.49e-09,2;UBERON:0000094,5.49e-09,2;UBERON:0010743,5.49e-09,2;UBERON:0011216,1.30e-08,223;UBERON:0010314,1.56e-08,132 | |||
|phase1_expression=0.363356758541113,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.02044907978036,0,0,0,0,0,0,0,0,0,0,2.65722415744152,1.80894657938112,0,0,0,1.53569778007781,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,2.10838001152805,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.2029051231617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,1.64023802976667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.3755727921195,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50493977876192,0,0.159633859057151,0.41023272848151,0,0.899044282034833,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.675375846183947,0,0.206686796501184,1.01465296310251,0,0,0,0,0,0,0,0,0,0,0,0,0.747667062745149,0.920818829879887,0,0,0,1.41404030924402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42782129400921,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.02044907978036,0,0,0,0,0,0,0,0,0,0,2.65722415744152,1.80894657938112,0,0,0,1.53569778007781,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,2.10838001152805,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.2029051231617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,1.64023802976667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.3755727921195,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50493977876192,0,0.159633859057151,0.41023272848151,0,0.899044282034833,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.675375846183947,0,0.206686796501184,1.01465296310251,0,0,0,0,0,0,0,0,0,0,0,0,0.747667062745149,0.920818829879887,0,0,0,1.41404030924402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42782129400921,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@PPP2R2C | |short_description=p16@PPP2R2C | ||
}} | }} |
Latest revision as of 05:30, 18 September 2015
Short description: | p16@PPP2R2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PPP2R2C_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000506140, NM_001206994, uc011bwe.1_5end |
EntrezGene: | PPP2R2C |
HGNC: | 9306 |
UniProt: | B7Z3Y1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data