FFCP PHASE1:Hg19::chr1:44497084..44497097,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:44497084..44497097,-
|short_description=p7@SLC6A9
|description=CAGE_peak_7_at_SLC6A9_5end
|association_with_transcript=3bp_to_ENST00000489764_5end
|Entrez...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6536 | |EntrezGene=6536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11056 | |HGNC=11056 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000489764_5end | |||
|cluster_id=chr1:44497084..44497097,- | |||
|description=CAGE_peak_7_at_SLC6A9_5end | |||
|id=chr1:44497084..44497097,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000197;2.27e-08;6!CL:0000098;2.27e-08;6!CL:0002167;2.27e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,9.22e-09,6;CL:0000098,9.22e-09,6;CL:0002167,9.22e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;1.39e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,6.43e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.49e-08!365;UBERON:0000924!5.78e-07!173;UBERON:0006601!5.78e-07!173 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.986680828671798,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.204000691244253,1.25381888591235,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,1.0843174571537,5.0133791063589,1.15877215168659,0,1.94653948121054,0.0945348171640679,0,0.175669571386252,0.196468613246569,1.45718115317017,1.11235332835329,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,2.48485975847659,0.886413581652058,0,1.14734648299525,1.41867352879343,0.560677600142307,1.06748995729705,1.48000529050296,0,0,0.163461903113459,0.756787138224657,0.576175924479999,2.34321431833797,0,0,0.448346041655403,0.117434498643765,0,0,0.408308342509787,0.245668634623536,0.826606249406124,0,0.989067717114227,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0.877955241761676,0,0.901428353439581,0.340296549480063,0.538168907066586,2.34913127700424,0.635795703478686,0.300091096084402,0.412210116953756,1.54584324027377,0.930584281657949,1.85653965465393,0.584622030967192,0.252433774244115,0.552299391853796,0.161646056818812,1.06502877754984,0.403008392910561,0.508681776931463,0.193260853163297,0.272746120590835,0.573609190778008,0,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0.473227200159376,1.34867752062481,0.241011029883482,0.772057809126758,1.08939722046203,0.71181185733329,0.539325232640658,0,0.38474715694639,0,0,0,0,0,2.94848165003288,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0.603173834469785,0.0925884451585296,1.3032332212413,0,0,0.463721619900307,0.587043471179108,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.53735113621709,1.74380363108377,1.15014803749563,0,0,0,0,0,0,0.381988425558278,0,1.71072446022705,0,0,0.571652865261156,0,0.43596006883328,0.07333828582095,0.387815147273333,3.57656445851882,0,2.12750493267896,2.08014873822732,0.257207374262142,0,0,0.142977993658148,1.62786481617433,0,0.325736184293735,0,0,0,0,0,0,0,0,1.4377491329495,1.14861935834114,0,0,0.61642896765115,0.358121926479791,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,1.66376689224646,1.60586089917446,1.26161932027148,1.28855556491985,0.902838299183157,0,2.0694614258501,1.32845119707087,0.184369168541703,0.434418072340414,0.587403472388222,0,0.206768026122887,0,0,0,0,0.907170879989041,0.248107807818777,1.07423381301644,1.40330047216537,1.02511319404561,1.53512174720011,0.64341568457443,1.48418066444991,0,0.177561725313127,0.164254312027618,0,0,0,0.200506470303285,0.460404944679482,1.26295892981067,0.728364672026868,0.917870904715969,0,0,0.784349769176855,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,1.66215201785745,0,2.19259876645935,2.87578996127391,0,0,0,0.103041011647722,0,0,0,1.95018073810956,3.21367859688319,0.773365746336976,0,0,0,0.322260734604821,0,0.0852266274161009,1.60257664164127,0.661139661443912,0.768760269460425,0.127612712494584,0.708104465988849,0,0.31481234683064,0,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0.744316738719335,0,0.38126038784765,0,0.42793898803392,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,1.46228093778771,0,0.136499911407986,1.27264888758341,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0.491245205065606,0.7133421029625,0,0,0,0,2.44954304171488,0.577332676353072,0.670302275535787,2.17781969722645,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,1.92495971052672,0,0,0.432807638929335,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0.445773537109913,0,0.23874448473769,0,0,0,0.422008249231538,0.779160935160341,0,0,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0.591860433821602,0,0,0.969332746095218,0,0,1.30213880542617,1.57427999993152,0.724999575434793,0.796554137998498,0.254253650292766,0.236387681767936,0,0.291604613383254,0.868124974666461,0,0.482385754501632,0,0.552896299656123,0.886642856860642,0,0.871507708151921,0.557694977114413,0.615602068030377,0,0,0.269272933229316,0.108647371922008,0.31900115973192,0.641183153813036,0,0,0,0,0.225595660617181,0.19606253431774,0,0.569261198172555,0,0,0,0,0,0,0.176915129006678,0.611030144933625,1.48260564340311,1.48276726735803,0.939797545549098,0.741412462787447,1.60515529459758,0.468528891450678,0.547364367646998,0.782658475728359,0.242780379534093,1.57833761139756,0,0.30607276163049,0.189559738885464,0.60129367765797,0.103688191397247,0,0,0,0,0,0.554698692052555,0,0.783939179315021,0.34823682632161,0.34945333648406,1.71986032471617,1.54810130062536,2.70430473218887,1.23173185579814,0.0969890164884194,0.441280633457501,0,0.274083849293502,0,0.189932387867636,0.391102765469606,0,0.426905989478705,1.9980960958213,0.288180834308212,0,0.686379991447858,0,0.124252535565433,0.471388069233591,0,0.104602846312333,1.12198039399954,0.577901179803038,0.600420288709789,0.547621515567972,1.27746588066972,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0.393915911536118,0.164831716762333,0.539228350833479,0.295282444544246,0,0,1.0896272488926,0,0.137539436597234,0,0,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0.105600336519406,0.179287339332845,1.53532157855556,0,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0.258565912723101,1.19009341568421,0.342173675768659,0,0.213574825135389,0.314408610199332,0.828478110694391,0,0.395223263795889,0,3.83004754662109,0,0,0,0,0.785270481251171,0,0.122026264901963,0.3755727921195,0,0.887432412294818,1.1177352529449,0.691743174681154,0,0.303298235083296,0,0.235265819698172,0,0.28984205722165,0.298509605773748,1.16856654923612,0,0.757612021100357,0.251567901752575,0,0.228840068396924,0.604923695052956,0.621748802331122,0,0,0.449803112163605,0.310525913752519,0,0,1.04349012362347,0,0.380805212168795,0,0,0.107410557042488,0.464033759878494,0,0,2.06037423109676,2.02049693259551,3.78554694685953,0,0.214441591374926,0.260994291965212,0.680117776536817,0,1.22368352253234,0,0,0.657852148736121,0,0.192914038270915,0.844712203265363,0,0,0,0.691292180758654,0,0,0,0,0,0.422624246717254,0,0,5.33866436948529,0.567515953566836,0.184105950251841,0.279759015438889,1.86623178009892,0.127894371303652,0,1.57265941855896,0.109209638192014,0.678930119816101,0.850299680406731,0.991486114072017,2.23457967189298,1.90802610392051,0.157723490002507,0,1.76337971845342,1.8374728641192,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.207471757392654,0.161475645631851,0,1.07962490351128,0,1.46742878817343,0.115525666150338,1.90691047733584,0,1.98916222116275,0.676892955143315,0,0.781514011233092,0.523813388962845,1.14640342257068,0.147856086217045,0.337687923091973,0.781078098613847,1.2401207790071,0.380494861163441,0.546974809018219,2.74128883428591,0,0.175871244359621,0.894336993477167,0,0.336283722218824,0,0,0,0.115233987555779,0,0.271878931907327,0.263091094251396,0.118193840883968,0.111231401892069,0.39246546425257,0.471346769748006,0.840816489941367,0,0,0,0.78624198594322,0.158013611732727,0,0.347716544605159,0,0.207216164163037,0.17071847709395,0,0.430227358820278,0,0,0,0.68732060563215,0,0,0.111855431797792,0.687051635306701,0,0,0.102662806856247,1.1598144313382,0,0,0,0.237840181555137,0.5647304101948,0,0.301925687133347,0.0771741581079447,0.874238242015829,0.470317296361523,0.735444965261716,0.471353094203252,0.588925401344836,0.891139200981258,1.2679671827502,1.86919826156599,0.187967835959707,0.193373663920732,0,0.178553938605658,0.352894871715692,0.160482733378337,0,0.458729283404541,0.716697915757256,0.315543124386369,0.611923411718232,0.872701380680755,0.5290268405154,0.371995018166751,0.924351257262837,0,0,0,0,0.917899467677836,0.26721740526556,0.0918948995348449,0,0.0757786982182394,0,0,0.827463966895162,0.639701945702943,0.476128862927481,0,0.0620747142958579,0.448527450322454,0,0.606351566874658,1.08858373948481,0,0.606168477131288,0.358611026963382,0.332660356546013,0.569822880276821,0.426909383510862,0,0.628776414746108,0,0.244482888365733,0.406896178315738,0.665756774185513,0.201273793591026,0 | |phase1_expression=0.54503513781167,1.07050261945492,0.986680828671798,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.204000691244253,1.25381888591235,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,1.0843174571537,5.0133791063589,1.15877215168659,0,1.94653948121054,0.0945348171640679,0,0.175669571386252,0.196468613246569,1.45718115317017,1.11235332835329,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,2.48485975847659,0.886413581652058,0,1.14734648299525,1.41867352879343,0.560677600142307,1.06748995729705,1.48000529050296,0,0,0.163461903113459,0.756787138224657,0.576175924479999,2.34321431833797,0,0,0.448346041655403,0.117434498643765,0,0,0.408308342509787,0.245668634623536,0.826606249406124,0,0.989067717114227,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0.877955241761676,0,0.901428353439581,0.340296549480063,0.538168907066586,2.34913127700424,0.635795703478686,0.300091096084402,0.412210116953756,1.54584324027377,0.930584281657949,1.85653965465393,0.584622030967192,0.252433774244115,0.552299391853796,0.161646056818812,1.06502877754984,0.403008392910561,0.508681776931463,0.193260853163297,0.272746120590835,0.573609190778008,0,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0.473227200159376,1.34867752062481,0.241011029883482,0.772057809126758,1.08939722046203,0.71181185733329,0.539325232640658,0,0.38474715694639,0,0,0,0,0,2.94848165003288,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0.603173834469785,0.0925884451585296,1.3032332212413,0,0,0.463721619900307,0.587043471179108,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.53735113621709,1.74380363108377,1.15014803749563,0,0,0,0,0,0,0.381988425558278,0,1.71072446022705,0,0,0.571652865261156,0,0.43596006883328,0.07333828582095,0.387815147273333,3.57656445851882,0,2.12750493267896,2.08014873822732,0.257207374262142,0,0,0.142977993658148,1.62786481617433,0,0.325736184293735,0,0,0,0,0,0,0,0,1.4377491329495,1.14861935834114,0,0,0.61642896765115,0.358121926479791,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,1.66376689224646,1.60586089917446,1.26161932027148,1.28855556491985,0.902838299183157,0,2.0694614258501,1.32845119707087,0.184369168541703,0.434418072340414,0.587403472388222,0,0.206768026122887,0,0,0,0,0.907170879989041,0.248107807818777,1.07423381301644,1.40330047216537,1.02511319404561,1.53512174720011,0.64341568457443,1.48418066444991,0,0.177561725313127,0.164254312027618,0,0,0,0.200506470303285,0.460404944679482,1.26295892981067,0.728364672026868,0.917870904715969,0,0,0.784349769176855,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,1.66215201785745,0,2.19259876645935,2.87578996127391,0,0,0,0.103041011647722,0,0,0,1.95018073810956,3.21367859688319,0.773365746336976,0,0,0,0.322260734604821,0,0.0852266274161009,1.60257664164127,0.661139661443912,0.768760269460425,0.127612712494584,0.708104465988849,0,0.31481234683064,0,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0.744316738719335,0,0.38126038784765,0,0.42793898803392,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,1.46228093778771,0,0.136499911407986,1.27264888758341,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0.491245205065606,0.7133421029625,0,0,0,0,2.44954304171488,0.577332676353072,0.670302275535787,2.17781969722645,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,1.92495971052672,0,0,0.432807638929335,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0.445773537109913,0,0.23874448473769,0,0,0,0.422008249231538,0.779160935160341,0,0,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0.591860433821602,0,0,0.969332746095218,0,0,1.30213880542617,1.57427999993152,0.724999575434793,0.796554137998498,0.254253650292766,0.236387681767936,0,0.291604613383254,0.868124974666461,0,0.482385754501632,0,0.552896299656123,0.886642856860642,0,0.871507708151921,0.557694977114413,0.615602068030377,0,0,0.269272933229316,0.108647371922008,0.31900115973192,0.641183153813036,0,0,0,0,0.225595660617181,0.19606253431774,0,0.569261198172555,0,0,0,0,0,0,0.176915129006678,0.611030144933625,1.48260564340311,1.48276726735803,0.939797545549098,0.741412462787447,1.60515529459758,0.468528891450678,0.547364367646998,0.782658475728359,0.242780379534093,1.57833761139756,0,0.30607276163049,0.189559738885464,0.60129367765797,0.103688191397247,0,0,0,0,0,0.554698692052555,0,0.783939179315021,0.34823682632161,0.34945333648406,1.71986032471617,1.54810130062536,2.70430473218887,1.23173185579814,0.0969890164884194,0.441280633457501,0,0.274083849293502,0,0.189932387867636,0.391102765469606,0,0.426905989478705,1.9980960958213,0.288180834308212,0,0.686379991447858,0,0.124252535565433,0.471388069233591,0,0.104602846312333,1.12198039399954,0.577901179803038,0.600420288709789,0.547621515567972,1.27746588066972,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0.393915911536118,0.164831716762333,0.539228350833479,0.295282444544246,0,0,1.0896272488926,0,0.137539436597234,0,0,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0.105600336519406,0.179287339332845,1.53532157855556,0,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0.258565912723101,1.19009341568421,0.342173675768659,0,0.213574825135389,0.314408610199332,0.828478110694391,0,0.395223263795889,0,3.83004754662109,0,0,0,0,0.785270481251171,0,0.122026264901963,0.3755727921195,0,0.887432412294818,1.1177352529449,0.691743174681154,0,0.303298235083296,0,0.235265819698172,0,0.28984205722165,0.298509605773748,1.16856654923612,0,0.757612021100357,0.251567901752575,0,0.228840068396924,0.604923695052956,0.621748802331122,0,0,0.449803112163605,0.310525913752519,0,0,1.04349012362347,0,0.380805212168795,0,0,0.107410557042488,0.464033759878494,0,0,2.06037423109676,2.02049693259551,3.78554694685953,0,0.214441591374926,0.260994291965212,0.680117776536817,0,1.22368352253234,0,0,0.657852148736121,0,0.192914038270915,0.844712203265363,0,0,0,0.691292180758654,0,0,0,0,0,0.422624246717254,0,0,5.33866436948529,0.567515953566836,0.184105950251841,0.279759015438889,1.86623178009892,0.127894371303652,0,1.57265941855896,0.109209638192014,0.678930119816101,0.850299680406731,0.991486114072017,2.23457967189298,1.90802610392051,0.157723490002507,0,1.76337971845342,1.8374728641192,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.207471757392654,0.161475645631851,0,1.07962490351128,0,1.46742878817343,0.115525666150338,1.90691047733584,0,1.98916222116275,0.676892955143315,0,0.781514011233092,0.523813388962845,1.14640342257068,0.147856086217045,0.337687923091973,0.781078098613847,1.2401207790071,0.380494861163441,0.546974809018219,2.74128883428591,0,0.175871244359621,0.894336993477167,0,0.336283722218824,0,0,0,0.115233987555779,0,0.271878931907327,0.263091094251396,0.118193840883968,0.111231401892069,0.39246546425257,0.471346769748006,0.840816489941367,0,0,0,0.78624198594322,0.158013611732727,0,0.347716544605159,0,0.207216164163037,0.17071847709395,0,0.430227358820278,0,0,0,0.68732060563215,0,0,0.111855431797792,0.687051635306701,0,0,0.102662806856247,1.1598144313382,0,0,0,0.237840181555137,0.5647304101948,0,0.301925687133347,0.0771741581079447,0.874238242015829,0.470317296361523,0.735444965261716,0.471353094203252,0.588925401344836,0.891139200981258,1.2679671827502,1.86919826156599,0.187967835959707,0.193373663920732,0,0.178553938605658,0.352894871715692,0.160482733378337,0,0.458729283404541,0.716697915757256,0.315543124386369,0.611923411718232,0.872701380680755,0.5290268405154,0.371995018166751,0.924351257262837,0,0,0,0,0.917899467677836,0.26721740526556,0.0918948995348449,0,0.0757786982182394,0,0,0.827463966895162,0.639701945702943,0.476128862927481,0,0.0620747142958579,0.448527450322454,0,0.606351566874658,1.08858373948481,0,0.606168477131288,0.358611026963382,0.332660356546013,0.569822880276821,0.426909383510862,0,0.628776414746108,0,0.244482888365733,0.406896178315738,0.665756774185513,0.201273793591026,0 | ||
|short_description=p7@SLC6A9 | |||
}} | }} |
Latest revision as of 05:48, 18 September 2015
Short description: | p7@SLC6A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC6A9_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000489764_5end |
EntrezGene: | SLC6A9 |
HGNC: | 11056 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 9.22e-09 | 6 |
sensory epithelial cell | 9.22e-09 | 6 |
olfactory epithelial cell | 9.22e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 6.43e-08 | 3 |