FFCP PHASE1:Hg19::chr1:161519682..161519691,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:161519682..161519691,-
|short_description=p7@FCGR3A
|description=CAGE_peak_7_at_FCGR3A_5end
|association_with_transcript=-103bp_to_ENST00000426740_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2214 | |EntrezGene=2214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3619 | |HGNC=3619 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-103bp_to_ENST00000426740_5end | |||
|cluster_id=chr1:161519682..161519691,- | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_7_at_FCGR3A_5end | |||
|id=chr1:161519682..161519691,- | |||
|ontology_enrichment_celltype=CL:0002393!2.05e-17!9;CL:0002397!2.05e-17!9;CL:0000875!3.34e-14!3;CL:0002396!3.34e-14!3;CL:0002194!4.14e-13!63;CL:0000576!4.14e-13!63;CL:0000040!4.14e-13!63;CL:0000559!4.14e-13!63;CL:0000842!8.35e-13!3;CL:0002009!1.34e-12!65;CL:0000766!8.89e-12!76;CL:0000839!1.89e-11!70;CL:0000557!3.07e-11!71;CL:0002087!3.30e-10!119;CL:0002057!4.94e-10!42;CL:0000224!1.02e-09!4;CL:0000860!3.26e-09!45;CL:0000738!5.64e-09!140;CL:0000763!8.21e-07!112;CL:0000049!8.21e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000875;4.06e-99;3!CL:0002396;4.06e-99;3!CL:0002393;1.73e-49;6!CL:0002397;1.73e-49;6!CL:0000576;2.27e-15;48!CL:0000766;5.47e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.42e-130,9;CL:0002397,1.42e-130,9;CL:0000875,4.06e-99,3;CL:0002396,4.06e-99,3;CL:0000860,1.39e-28,42;CL:0002057,1.39e-28,42;CL:0000473,4.34e-25,48;CL:0000234,4.34e-25,48;CL:0002194,3.46e-20,59;CL:0000576,3.46e-20,59;CL:0000040,3.46e-20,59;CL:0000559,3.46e-20,59;CL:0002009,1.49e-19,61;CL:0000839,3.91e-18,66;CL:0000557,7.10e-18,67;CL:0000766,1.10e-16,72;CL:0000763,2.52e-11,108;CL:0000049,2.52e-11,108;CL:0002087,1.15e-10,115;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.91e-20;42!CL:0000049;7.76e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.84e-16!102;UBERON:0003061!6.84e-16!102;UBERON:0007023!3.74e-14!115;UBERON:0002193!5.43e-14!112;UBERON:0002405!1.23e-09!115;UBERON:0002371!1.38e-09!80;UBERON:0001474!1.12e-08!86;UBERON:0002298!2.66e-08!8;UBERON:0002308!1.59e-07!9;UBERON:0000125!1.59e-07!9;UBERON:0001049!2.22e-07!57;UBERON:0005068!2.22e-07!57;UBERON:0006241!2.22e-07!57;UBERON:0007135!2.22e-07!57;UBERON:0004765!6.86e-07!101;UBERON:0001434!6.86e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.61e-16,76;UBERON:0001474,9.81e-15,82;UBERON:0004765,1.76e-13,90;UBERON:0002405,4.60e-13,93;UBERON:0002390,2.00e-12,98;UBERON:0003061,2.00e-12,98;UBERON:0001434,3.45e-12,100;UBERON:0002193,2.52e-11,108;UBERON:0002204,1.81e-07,167 | |||
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| ||
|short_description=p7@FCGR3A | |||
}} | }} |
Latest revision as of 06:17, 18 September 2015
Short description: | p7@FCGR3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FCGR3A_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -103bp_to_ENST00000426740_5end |
EntrezGene: | FCGR3A |
HGNC: | 3619 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.42e-130 | 9 |
CD14-positive, CD16-positive monocyte | 1.42e-130 | 9 |
non-classical monocyte | 4.06e-99 | 3 |
CD14-low, CD16-positive monocyte | 4.06e-99 | 3 |
classical monocyte | 1.39e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-28 | 42 |
defensive cell | 4.34e-25 | 48 |
phagocyte | 4.34e-25 | 48 |
monopoietic cell | 3.46e-20 | 59 |
monocyte | 3.46e-20 | 59 |
monoblast | 3.46e-20 | 59 |
promonocyte | 3.46e-20 | 59 |
macrophage dendritic cell progenitor | 1.49e-19 | 61 |
myeloid lineage restricted progenitor cell | 3.91e-18 | 66 |
granulocyte monocyte progenitor cell | 7.10e-18 | 67 |
myeloid leukocyte | 1.10e-16 | 72 |
myeloid cell | 2.52e-11 | 108 |
common myeloid progenitor | 2.52e-11 | 108 |
nongranular leukocyte | 1.15e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.06e-10 | 120 |
leukocyte | 4.36e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.61e-16 | 76 |
bone element | 9.81e-15 | 82 |
skeletal element | 1.76e-13 | 90 |
immune system | 4.60e-13 | 93 |
hematopoietic system | 2.00e-12 | 98 |
blood island | 2.00e-12 | 98 |
skeletal system | 3.45e-12 | 100 |
hemolymphoid system | 2.52e-11 | 108 |
musculoskeletal system | 1.81e-07 | 167 |