FFCP PHASE1:Hg19::chr10:45406662..45406696,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643236 | |EntrezGene=643236 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31658 | |HGNC=31658 | ||
|TSSclassifier=strong | |||
|UniProt=A0PK05 | |UniProt=A0PK05 | ||
|association_with_transcript=14bp_to_ENST00000389583_5end | |association_with_transcript=14bp_to_ENST00000389583_5end | ||
|cluster_id=chr10:45406662..45406696,+ | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_3_at_TMEM72_5end | |description=CAGE_peak_3_at_TMEM72_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.67e-07;10!UBERON:0007687;1.67e-07;10!UBERON:0003056;5.80e-07;3 | |ontology_enrichment_development_v019=UBERON:0003918;1.67e-07;10!UBERON:0007687;1.67e-07;10!UBERON:0003056;5.80e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:9119;3.74e-18;1 | |ontology_enrichment_disease_v019=DOID:9119;3.74e-18;1 | ||
|ontology_enrichment_disease_v019_2=DOID:9119,3.75e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.74e-17!90;UBERON:0001049!3.22e-16!57;UBERON:0005068!3.22e-16!57;UBERON:0006241!3.22e-16!57;UBERON:0007135!3.22e-16!57;UBERON:0002616!1.56e-15!59;UBERON:0007023!2.99e-15!115;UBERON:0003075!4.32e-15!86;UBERON:0007284!4.32e-15!86;UBERON:0000955!4.38e-14!69;UBERON:0006238!4.38e-14!69;UBERON:0000153!9.86e-14!129;UBERON:0007811!9.86e-14!129;UBERON:0005743!2.11e-13!86;UBERON:0000073!4.42e-13!94;UBERON:0001016!4.42e-13!94;UBERON:0001896!8.79e-13!3;UBERON:0005290!8.79e-13!3;UBERON:0010096!8.79e-13!3;UBERON:0002298!4.76e-12!8;UBERON:0001017!3.29e-11!82;UBERON:0000033!4.43e-11!123;UBERON:0004733!5.02e-11!12;UBERON:0002028!5.02e-11!12;UBERON:0007277!5.02e-11!12;UBERON:0000924!1.34e-10!173;UBERON:0006601!1.34e-10!173;UBERON:0004732!4.01e-10!13;UBERON:0002780!7.24e-10!41;UBERON:0001890!7.24e-10!41;UBERON:0006240!7.24e-10!41;UBERON:0003056!8.59e-10!61;UBERON:0003080!1.40e-09!42;UBERON:0003296!2.88e-09!4;UBERON:0010133!2.88e-09!4;UBERON:0004121!4.77e-09!169;UBERON:0001905!7.50e-09!2;UBERON:0002757!7.50e-09!2;UBERON:0010134!7.50e-09!2;UBERON:0002784!7.50e-09!2;UBERON:0005408!7.50e-09!2;UBERON:0001899!7.50e-09!2;UBERON:0001894!9.35e-09!7;UBERON:0006222!9.35e-09!7;UBERON:0003076!1.11e-08!15;UBERON:0003057!1.11e-08!15 | |ontology_enrichment_uberon=UBERON:0002346!1.74e-17!90;UBERON:0001049!3.22e-16!57;UBERON:0005068!3.22e-16!57;UBERON:0006241!3.22e-16!57;UBERON:0007135!3.22e-16!57;UBERON:0002616!1.56e-15!59;UBERON:0007023!2.99e-15!115;UBERON:0003075!4.32e-15!86;UBERON:0007284!4.32e-15!86;UBERON:0000955!4.38e-14!69;UBERON:0006238!4.38e-14!69;UBERON:0000153!9.86e-14!129;UBERON:0007811!9.86e-14!129;UBERON:0005743!2.11e-13!86;UBERON:0000073!4.42e-13!94;UBERON:0001016!4.42e-13!94;UBERON:0001896!8.79e-13!3;UBERON:0005290!8.79e-13!3;UBERON:0010096!8.79e-13!3;UBERON:0002298!4.76e-12!8;UBERON:0001017!3.29e-11!82;UBERON:0000033!4.43e-11!123;UBERON:0004733!5.02e-11!12;UBERON:0002028!5.02e-11!12;UBERON:0007277!5.02e-11!12;UBERON:0000924!1.34e-10!173;UBERON:0006601!1.34e-10!173;UBERON:0004732!4.01e-10!13;UBERON:0002780!7.24e-10!41;UBERON:0001890!7.24e-10!41;UBERON:0006240!7.24e-10!41;UBERON:0003056!8.59e-10!61;UBERON:0003080!1.40e-09!42;UBERON:0003296!2.88e-09!4;UBERON:0010133!2.88e-09!4;UBERON:0004121!4.77e-09!169;UBERON:0001905!7.50e-09!2;UBERON:0002757!7.50e-09!2;UBERON:0010134!7.50e-09!2;UBERON:0002784!7.50e-09!2;UBERON:0005408!7.50e-09!2;UBERON:0001899!7.50e-09!2;UBERON:0001894!9.35e-09!7;UBERON:0006222!9.35e-09!7;UBERON:0003076!1.11e-08!15;UBERON:0003057!1.11e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;3.29e-23;3!UBERON:0005290;3.29e-23;3!UBERON:0002298;4.07e-12;6!UBERON:0001905;1.57e-09;2!UBERON:0002757;1.57e-09;2!UBERON:0010134;1.57e-09;2!UBERON:0005408;1.57e-09;2!UBERON:0001899;1.57e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0001896;3.29e-23;3!UBERON:0005290;3.29e-23;3!UBERON:0002298;4.07e-12;6!UBERON:0001905;1.57e-09;2!UBERON:0002757;1.57e-09;2!UBERON:0010134;1.57e-09;2!UBERON:0005408;1.57e-09;2!UBERON:0001899;1.57e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,3.29e-23,3;UBERON:0005290,3.29e-23,3;UBERON:0010096,3.29e-23,3;UBERON:0002298,4.07e-12,6;UBERON:0001905,1.57e-09,2;UBERON:0002757,1.57e-09,2;UBERON:0010134,1.57e-09,2;UBERON:0005408,1.57e-09,2;UBERON:0001899,1.57e-09,2 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,1.4245125703478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9538809540204,0,0,0.540911356951966,3.3307196799782,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0.794682894901893,0,0,0,0,0.995261931078505,0,0,0,0,0,0.943615861729479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,4.06765333404958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0,0.408610218334727,0,0,0,0,0,0,0,1.33969702408637,1.20645552710496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29363678276028,2.77322628842131,0.683060432355218,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0.678930119816101,0,0.743614585554013,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0.535701835878287,1.3451348888753,0,0.455324382702595,0,0,0,0.40781839786099,0,0,0,0,0,0,0,0,0,13.1516841285048,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0.258355639344024,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,1.4245125703478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9538809540204,0,0,0.540911356951966,3.3307196799782,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0.794682894901893,0,0,0,0,0.995261931078505,0,0,0,0,0,0.943615861729479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,4.06765333404958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0,0.408610218334727,0,0,0,0,0,0,0,1.33969702408637,1.20645552710496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29363678276028,2.77322628842131,0.683060432355218,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0.678930119816101,0,0.743614585554013,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0.535701835878287,1.3451348888753,0,0.455324382702595,0,0,0,0.40781839786099,0,0,0,0,0,0,0,0,0,13.1516841285048,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0.258355639344024,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@TMEM72 | |short_description=p3@TMEM72 | ||
}} | }} |
Latest revision as of 06:53, 18 September 2015
Short description: | p3@TMEM72 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM72_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 14bp_to_ENST00000389583_5end |
EntrezGene: | TMEM72 |
HGNC: | 31658 |
UniProt: | A0PK05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 3.29e-23 | 3 |
myelencephalon | 3.29e-23 | 3 |
future myelencephalon | 3.29e-23 | 3 |
brainstem | 4.07e-12 | 6 |
pineal body | 1.57e-09 | 2 |
regional part of epithalamus | 1.57e-09 | 2 |
secretory circumventricular organ | 1.57e-09 | 2 |
circumventricular organ | 1.57e-09 | 2 |
epithalamus | 1.57e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 3.75e-18 | 1 |