FFCP PHASE1:Hg19::chr3:42897538..42897546,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1238 | |EntrezGene=1238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1565 | |HGNC=1565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000493193_5end | |association_with_transcript=9bp_to_ENST00000493193_5end | ||
|cluster_id=chr3:42897538..42897546,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_9_at_CCBP2_5end | |description=CAGE_peak_9_at_CCBP2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!1.35e-45!12;CL:0000417!1.35e-45!12;CL:0000668!1.35e-45!12;CL:0000414!1.35e-45!12;CL:0000412!1.35e-45!12;CL:0000182!1.35e-45!12;CL:0000223!2.82e-12!59 | |ontology_enrichment_celltype=CL:0000181!1.35e-45!12;CL:0000417!1.35e-45!12;CL:0000668!1.35e-45!12;CL:0000414!1.35e-45!12;CL:0000412!1.35e-45!12;CL:0000182!1.35e-45!12;CL:0000223!2.82e-12!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.66e-14;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.66e-14;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.57e-14,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.69e-39!19;UBERON:0006925!4.69e-39!19;UBERON:0008836!4.69e-39!19;UBERON:0009497!1.93e-38!25;UBERON:0000015!1.93e-38!25;UBERON:0002423!1.93e-38!25;UBERON:0006235!1.93e-38!25;UBERON:0004161!1.93e-38!25;UBERON:0008835!1.07e-33!22;UBERON:0003894!1.07e-33!22;UBERON:0009854!3.19e-32!23;UBERON:0007499!1.27e-29!25;UBERON:0005057!1.79e-28!26;UBERON:0009856!1.79e-28!26;UBERON:0002365!7.83e-24!31;UBERON:0002330!7.83e-24!31;UBERON:0003929!4.02e-22!54;UBERON:0002368!4.52e-21!35;UBERON:0005172!3.36e-17!55;UBERON:0005173!3.36e-17!55;UBERON:0000949!2.63e-16!45;UBERON:0002417!1.88e-15!61;UBERON:0000916!1.88e-15!61;UBERON:0005911!2.56e-14!82;UBERON:0002530!2.45e-12!59;UBERON:0001007!7.69e-09!155;UBERON:0001555!7.69e-09!155;UBERON:0007026!7.69e-09!155;UBERON:0004921!1.02e-08!129;UBERON:0004185!1.02e-08!129;UBERON:0005177!1.59e-08!107;UBERON:0000490!3.63e-08!138;UBERON:0009569!4.92e-08!113;UBERON:0004119!5.01e-08!169;UBERON:0000925!5.01e-08!169;UBERON:0006595!5.01e-08!169;UBERON:0003914!1.16e-07!118;UBERON:0001041!3.14e-07!98;UBERON:0000466!3.95e-07!126;UBERON:0000077!6.90e-07!130 | |ontology_enrichment_uberon=UBERON:0002107!4.69e-39!19;UBERON:0006925!4.69e-39!19;UBERON:0008836!4.69e-39!19;UBERON:0009497!1.93e-38!25;UBERON:0000015!1.93e-38!25;UBERON:0002423!1.93e-38!25;UBERON:0006235!1.93e-38!25;UBERON:0004161!1.93e-38!25;UBERON:0008835!1.07e-33!22;UBERON:0003894!1.07e-33!22;UBERON:0009854!3.19e-32!23;UBERON:0007499!1.27e-29!25;UBERON:0005057!1.79e-28!26;UBERON:0009856!1.79e-28!26;UBERON:0002365!7.83e-24!31;UBERON:0002330!7.83e-24!31;UBERON:0003929!4.02e-22!54;UBERON:0002368!4.52e-21!35;UBERON:0005172!3.36e-17!55;UBERON:0005173!3.36e-17!55;UBERON:0000949!2.63e-16!45;UBERON:0002417!1.88e-15!61;UBERON:0000916!1.88e-15!61;UBERON:0005911!2.56e-14!82;UBERON:0002530!2.45e-12!59;UBERON:0001007!7.69e-09!155;UBERON:0001555!7.69e-09!155;UBERON:0007026!7.69e-09!155;UBERON:0004921!1.02e-08!129;UBERON:0004185!1.02e-08!129;UBERON:0005177!1.59e-08!107;UBERON:0000490!3.63e-08!138;UBERON:0009569!4.92e-08!113;UBERON:0004119!5.01e-08!169;UBERON:0000925!5.01e-08!169;UBERON:0006595!5.01e-08!169;UBERON:0003914!1.16e-07!118;UBERON:0001041!3.14e-07!98;UBERON:0000466!3.95e-07!126;UBERON:0000077!6.90e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.31e-19;19!UBERON:0006925;1.31e-19;19!UBERON:0002423;3.99e-15;25!UBERON:0002365;9.49e-13;31!UBERON:0002330;9.49e-13;31!UBERON:0002368;8.69e-10;33!UBERON:0000949;1.69e-08;43!UBERON:0005172;6.31e-07;52!UBERON:0005173;6.31e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.31e-19;19!UBERON:0006925;1.31e-19;19!UBERON:0002423;3.99e-15;25!UBERON:0002365;9.49e-13;31!UBERON:0002330;9.49e-13;31!UBERON:0002368;8.69e-10;33!UBERON:0000949;1.69e-08;43!UBERON:0005172;6.31e-07;52!UBERON:0005173;6.31e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.31e-19,19;UBERON:0006925,1.31e-19,19;UBERON:0008836,1.31e-19,19;UBERON:0008835,4.60e-17,22;UBERON:0003894,4.60e-17,22;UBERON:0009854,2.31e-16,23;UBERON:0007499,3.99e-15,25;UBERON:0009497,3.99e-15,25;UBERON:0000015,3.99e-15,25;UBERON:0002423,3.99e-15,25;UBERON:0006235,3.99e-15,25;UBERON:0004161,3.99e-15,25;UBERON:0009856,1.41e-14,26;UBERON:0002365,2.30e-12,31;UBERON:0002330,2.30e-12,31;UBERON:0002368,4.78e-11,35;UBERON:0000949,9.12e-09,45;UBERON:0003929,1.99e-07,54;UBERON:0005172,1.99e-07,54;UBERON:0005173,1.99e-07,54;UBERON:0002530,7.38e-07,59;UBERON:0002417,9.34e-07,60;UBERON:0000916,9.34e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1404027857465,0.982827216677626,5.90789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.247247575143499,0.404421263125109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71553711344522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1404027857465,0.982827216677626,5.90789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.247247575143499,0.404421263125109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71553711344522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@CCBP2 | |short_description=p9@CCBP2 | ||
}} | }} |
Latest revision as of 07:02, 18 September 2015
Short description: | p9@CCBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CCBP2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 9bp_to_ENST00000493193_5end |
EntrezGene: | CCBP2 |
HGNC: | 1565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.57e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.31e-19 | 19 |
digestive gland | 1.31e-19 | 19 |
liver bud | 1.31e-19 | 19 |
hepatic diverticulum | 4.60e-17 | 22 |
liver primordium | 4.60e-17 | 22 |
digestive tract diverticulum | 2.31e-16 | 23 |
epithelial sac | 3.99e-15 | 25 |
epithelium of foregut-midgut junction | 3.99e-15 | 25 |
anatomical boundary | 3.99e-15 | 25 |
hepatobiliary system | 3.99e-15 | 25 |
foregut-midgut junction | 3.99e-15 | 25 |
septum transversum | 3.99e-15 | 25 |
sac | 1.41e-14 | 26 |
exocrine gland | 2.30e-12 | 31 |
exocrine system | 2.30e-12 | 31 |
endocrine gland | 4.78e-11 | 35 |
endocrine system | 9.12e-09 | 45 |
gut epithelium | 1.99e-07 | 54 |
abdomen element | 1.99e-07 | 54 |
abdominal segment element | 1.99e-07 | 54 |
gland | 7.38e-07 | 59 |
abdominal segment of trunk | 9.34e-07 | 60 |
abdomen | 9.34e-07 | 60 |