FFCP PHASE1:Hg19::chr9:95055931..95055951,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3376 | |EntrezGene=3376 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5330 | |HGNC=5330 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TCC9,Q5TCC5 | |UniProt=Q5TCC9,Q5TCC5 | ||
|association_with_transcript=-8bp_to_,8bp_to_ENST00000430417,ENST00000436450_5end | |association_with_transcript=-8bp_to_,8bp_to_ENST00000430417,ENST00000436450_5end | ||
|cluster_id=chr9:95055931..95055951,- | |||
|coexpression_cluster_id=C4683 | |coexpression_cluster_id=C4683 | ||
|description=CAGE_peak_2_at_IARS_5end | |description=CAGE_peak_2_at_IARS_5end | ||
|id=chr9:95055931..95055951,- | |id=chr9:95055931..95055951,- | ||
|ontology_enrichment_celltype=CL:0000548!2.12e-24!679;CL:0000004!2.12e-24!679;CL:0000255!2.12e-24!679;CL:0000012!6.88e-24!682;CL:0000055!2.83e-16!180;CL:0000144!9.84e-13!625;CL:0000003!5.19e-11!722;CL:0000057!7.72e-11!75;CL:0000063!3.04e-10!578;CL:0002620!4.75e-08!23;CL:0002321!8.27e-08!248;CL:0002371!9.93e-08!591;CL:0000220!1.22e-07!246 | |ontology_enrichment_celltype=CL:0000548!2.12e-24!679;CL:0000004!2.12e-24!679;CL:0000255!2.12e-24!679;CL:0000012!6.88e-24!682;CL:0000055!2.83e-16!180;CL:0000144!9.84e-13!625;CL:0000003!5.19e-11!722;CL:0000057!7.72e-11!75;CL:0000063!3.04e-10!578;CL:0002620!4.75e-08!23;CL:0002321!8.27e-08!248;CL:0002371!9.93e-08!591;CL:0000220!1.22e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.04e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.21e-11,76;CL:0002620,4.74e-08,23;CL:0002321,8.04e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.64e-27!239;DOID:162!2.02e-26!235;DOID:0050687!5.35e-16!143;DOID:0050686!2.85e-12!137;DOID:305!1.35e-08!106 | |ontology_enrichment_disease=DOID:14566!1.64e-27!239;DOID:162!2.02e-26!235;DOID:0050687!5.35e-16!143;DOID:0050686!2.85e-12!137;DOID:305!1.35e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.62e-27,239;DOID:162,1.99e-26,235;DOID:0050687,5.32e-16,143;DOID:0050686,2.84e-12,137;DOID:305,1.34e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002097!8.75e-07!40 | |ontology_enrichment_uberon=UBERON:0002097!8.75e-07!40 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@IARS | |short_description=p2@IARS | ||
}} | }} |
Latest revision as of 07:06, 18 September 2015
Short description: | p2@IARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IARS_5end |
Coexpression cluster: | C4683_Preadipocyte_giant_Smooth_Fibroblast_melanoma_Ewing_mesenchymal |
Association with transcript: | -8bp_to_, 8bp_to_ENST00000430417, ENST00000436450_5end |
EntrezGene: | IARS |
HGNC: | 5330 |
UniProt: | Q5TCC9Q5TCC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.21e-11 | 76 |
skin fibroblast | 4.74e-08 | 23 |
embryonic cell | 8.04e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.62e-27 | 239 |
cancer | 1.99e-26 | 235 |
cell type cancer | 5.32e-16 | 143 |
organ system cancer | 2.84e-12 | 137 |
carcinoma | 1.34e-08 | 106 |