FFCP PHASE1:Hg19::chr12:41221646..41221663,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=2171 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q12860 | ||
|association_with_transcript=-197bp_to_ENST00000547849,uc001rmo.2_5end | |association_with_transcript=-197bp_to_ENST00000547849,uc001rmo.2_5end | ||
|cluster_id=chr12:41221646..41221663,+ | |cluster_id=chr12:41221646..41221663,+ | ||
Latest revision as of 07:16, 18 September 2015
| Short description: | p10@CNTN1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_10_at_CNTN1_5end |
| Coexpression cluster: | C1014_hippocampus_locus_spinal_medulla_neuroectodermal_cerebellum_thalamus |
| Association with transcript: | -197bp_to_ENST00000547849, uc001rmo.2_5end |
| EntrezGene: | CNTN1 |
| HGNC: | 2171 |
| UniProt: | Q12860 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p10@CNTN1 |
|---|
0
1
2
3
4
5
6
7
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 4.37e-68 | 56 |
| neural rod | 4.37e-68 | 56 |
| future spinal cord | 4.37e-68 | 56 |
| neural keel | 4.37e-68 | 56 |
| regional part of cerebral cortex | 1.81e-67 | 22 |
| regional part of nervous system | 4.68e-60 | 53 |
| regional part of brain | 4.68e-60 | 53 |
| cerebral hemisphere | 1.34e-59 | 32 |
| cerebral cortex | 2.27e-59 | 25 |
| pallium | 2.27e-59 | 25 |
Showing 1 to 10 of 81 entries
