FFCP PHASE1:Hg19::chr19:42463447..42463513,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10567 | |EntrezGene=10567 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9794 | |HGNC=9794 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UI14 | |UniProt=Q9UI14 | ||
|association_with_transcript=14bp_to_ENST00000222008,NM_006423,uc002osf.2_5end | |association_with_transcript=14bp_to_ENST00000222008,NM_006423,uc002osf.2_5end | ||
|cluster_id=chr19:42463447..42463513,- | |||
|coexpression_cluster_id=C1353 | |||
|description=CAGE_peak_1_at_RABAC1_5end | |description=CAGE_peak_1_at_RABAC1_5end | ||
|id=chr19:42463447..42463513,- | |id=chr19:42463447..42463513,- | ||
|ontology_enrichment_celltype=CL:0000055!1.28e-31!180;CL:0000183!1.06e-22!59;CL:0000222!1.35e-22!119;CL:0000680!1.15e-21!57;CL:0000056!1.15e-21!57;CL:0000355!1.15e-21!57;CL:0000187!8.69e-21!54;CL:0000393!2.08e-20!60;CL:0000211!2.08e-20!60;CL:0000192!5.79e-20!42;CL:0000514!5.79e-20!42;CL:0000144!5.46e-19!625;CL:0000359!4.13e-17!32;CL:0002371!6.47e-16!591;CL:0002321!9.96e-16!248;CL:0000220!1.34e-15!246;CL:0000057!1.49e-12!75;CL:0000012!1.48e-08!682;CL:0000548!2.76e-08!679;CL:0000004!2.76e-08!679;CL:0000255!2.76e-08!679;CL:0002494!1.74e-07!16;CL:0000034!7.78e-07!444 | |ontology_enrichment_celltype=CL:0000055!1.28e-31!180;CL:0000183!1.06e-22!59;CL:0000222!1.35e-22!119;CL:0000680!1.15e-21!57;CL:0000056!1.15e-21!57;CL:0000355!1.15e-21!57;CL:0000187!8.69e-21!54;CL:0000393!2.08e-20!60;CL:0000211!2.08e-20!60;CL:0000192!5.79e-20!42;CL:0000514!5.79e-20!42;CL:0000144!5.46e-19!625;CL:0000359!4.13e-17!32;CL:0002371!6.47e-16!591;CL:0002321!9.96e-16!248;CL:0000220!1.34e-15!246;CL:0000057!1.49e-12!75;CL:0000012!1.48e-08!682;CL:0000548!2.76e-08!679;CL:0000004!2.76e-08!679;CL:0000255!2.76e-08!679;CL:0002494!1.74e-07!16;CL:0000034!7.78e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.91e-16;32!CL:0000192;2.58e-14;43!CL:0000187;1.68e-11;55!CL:0000393;1.32e-10;61!CL:0000211;1.32e-10;61!CL:0000134;2.20e-09;55!CL:0000723;6.24e-08;61!CL:0000048;1.09e-07;58!CL:0002494;1.74e-07;16!CL:0000349;1.77e-07;19!CL:0000034;4.06e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.01e-23,121;CL:0000680,8.87e-22,58;CL:0000056,8.87e-22,58;CL:0000355,8.87e-22,58;CL:0000187,6.77e-21,55;CL:0000393,1.56e-20,61;CL:0000211,1.56e-20,61;CL:0000192,4.91e-20,43;CL:0000514,4.91e-20,43;CL:0000359,4.13e-17,32;CL:0002321,4.60e-16,250;CL:0000057,6.00e-13,76;CL:0000034,1.49e-07,441;CL:0002494,1.74e-07,16;CL:0000349,1.75e-07,19;CL:0000048,2.71e-07,427;CL:0000723,4.33e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;2.58e-14;43!CL:0000355;1.76e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.70e-21!83;UBERON:0002329!3.70e-21!83;UBERON:0003077!3.70e-21!83;UBERON:0003059!3.70e-21!83;UBERON:0007282!3.70e-21!83;UBERON:0009618!3.70e-21!83;UBERON:0007285!3.70e-21!83;UBERON:0004872!7.55e-21!84;UBERON:0002049!3.34e-20!79;UBERON:0007798!3.34e-20!79;UBERON:0004290!8.68e-20!70;UBERON:0000486!1.07e-19!82;UBERON:0001637!2.27e-19!42;UBERON:0003509!2.27e-19!42;UBERON:0004572!2.27e-19!42;UBERON:0001134!7.49e-19!61;UBERON:0002036!7.49e-19!61;UBERON:0003082!7.49e-19!61;UBERON:0000055!2.34e-18!69;UBERON:0001981!4.72e-18!60;UBERON:0007500!4.72e-18!60;UBERON:0004537!4.72e-18!60;UBERON:0006965!4.72e-18!60;UBERON:0002385!1.56e-17!63;UBERON:0001015!1.56e-17!63;UBERON:0000383!1.56e-17!63;UBERON:0004573!6.43e-16!33;UBERON:0004571!6.43e-16!33;UBERON:0005256!6.57e-16!143;UBERON:0004535!7.73e-16!110;UBERON:0003914!1.23e-15!118;UBERON:0001009!3.09e-15!113;UBERON:0000490!7.46e-14!138;UBERON:0002100!7.76e-12!216;UBERON:0000119!4.56e-10!312;UBERON:0000483!7.22e-10!309;UBERON:0000475!1.51e-09!365;UBERON:0000947!5.39e-09!21;UBERON:0010191!5.39e-09!21;UBERON:0004111!6.39e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.15e-14;33!UBERON:0004571;2.15e-14;33!UBERON:0001637;9.10e-14;42!UBERON:0003509;9.10e-14;42!UBERON:0004572;9.10e-14;42!UBERON:0007500;7.39e-11;56!UBERON:0001981;7.39e-11;56!UBERON:0004537;7.39e-11;56!UBERON:0000055;4.74e-09;65!UBERON:0000947;5.49e-09;21!UBERON:0010191;5.49e-09;21!UBERON:0002049;1.35e-08;75!UBERON:0007798;1.35e-08;75!UBERON:0003914;1.71e-08;74 | |||
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| ||
|short_description=p1@RABAC1 | |short_description=p1@RABAC1 | ||
}} | }} |
Latest revision as of 07:18, 18 September 2015
Short description: | p1@RABAC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RABAC1_5end |
Coexpression cluster: | C1353_Mesenchymal_Preadipocyte_basal_Adipocyte_Fibroblast_Smooth_leiomyoma |
Association with transcript: | 14bp_to_ENST00000222008, NM_006423, uc002osf.2_5end |
EntrezGene: | RABAC1 |
HGNC: | 9794 |
UniProt: | Q9UI14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.01e-23 | 121 |
muscle precursor cell | 8.87e-22 | 58 |
myoblast | 8.87e-22 | 58 |
multi-potent skeletal muscle stem cell | 8.87e-22 | 58 |
muscle cell | 6.77e-21 | 55 |
electrically responsive cell | 1.56e-20 | 61 |
electrically active cell | 1.56e-20 | 61 |
smooth muscle cell | 4.91e-20 | 43 |
smooth muscle myoblast | 4.91e-20 | 43 |
vascular associated smooth muscle cell | 4.13e-17 | 32 |
embryonic cell | 4.60e-16 | 250 |
fibroblast | 6.00e-13 | 76 |
stem cell | 1.49e-07 | 441 |
cardiocyte | 1.74e-07 | 16 |
extraembryonic cell | 1.75e-07 | 19 |
multi fate stem cell | 2.71e-07 | 427 |
somatic stem cell | 4.33e-07 | 433 |