FFCP PHASE1:Hg19::chr1:45956800..45956821,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10420 | |EntrezGene=10420 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11732 | |HGNC=11732 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWP9 | |UniProt=F5GWP9 | ||
|association_with_transcript=0bp_to_ENST00000538496_5end | |association_with_transcript=0bp_to_ENST00000538496_5end | ||
|cluster_id=chr1:45956800..45956821,- | |||
|description=CAGE_peak_2_at_TESK2_5end | |description=CAGE_peak_2_at_TESK2_5end | ||
|id=chr1:45956800..45956821,- | |id=chr1:45956800..45956821,- | ||
|ontology_enrichment_celltype=CL:0002031!3.77e-13!124;CL:0000738!7.11e-13!140;CL:0002032!1.64e-11!165;CL:0000837!1.64e-11!165;CL:0000766!2.23e-11!76;CL:0000037!5.30e-11!172;CL:0000566!5.30e-11!172;CL:0000839!5.36e-10!70;CL:0000988!6.56e-10!182;CL:0002087!1.01e-09!119;CL:0000557!1.66e-09!71;CL:0000763!1.12e-08!112;CL:0000049!1.12e-08!112;CL:0002057!4.88e-08!42;CL:0000860!7.25e-08!45;CL:0002009!8.38e-08!65;CL:0002194!3.48e-07!63;CL:0000576!3.48e-07!63;CL:0000040!3.48e-07!63;CL:0000559!3.48e-07!63 | |ontology_enrichment_celltype=CL:0002031!3.77e-13!124;CL:0000738!7.11e-13!140;CL:0002032!1.64e-11!165;CL:0000837!1.64e-11!165;CL:0000766!2.23e-11!76;CL:0000037!5.30e-11!172;CL:0000566!5.30e-11!172;CL:0000839!5.36e-10!70;CL:0000988!6.56e-10!182;CL:0002087!1.01e-09!119;CL:0000557!1.66e-09!71;CL:0000763!1.12e-08!112;CL:0000049!1.12e-08!112;CL:0002057!4.88e-08!42;CL:0000860!7.25e-08!45;CL:0002009!8.38e-08!65;CL:0002194!3.48e-07!63;CL:0000576!3.48e-07!63;CL:0000040!3.48e-07!63;CL:0000559!3.48e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.89e-08;33!CL:0002057;9.89e-08;33!CL:0000473;1.87e-07;39!CL:0000234;1.87e-07;39 | |ontology_enrichment_celltype_v019=CL:0000860;9.89e-08;33!CL:0002057;9.89e-08;33!CL:0000473;1.87e-07;39!CL:0000234;1.87e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.35e-12,120;CL:0000738,9.74e-12,136;CL:0000766,4.03e-10,72;CL:0002032,5.83e-10,161;CL:0000837,5.83e-10,161;CL:0000037,1.51e-09,168;CL:0000839,1.89e-09,66;CL:0000557,3.93e-09,67;CL:0002087,6.65e-09,115;CL:0000988,7.38e-09,177;CL:0000473,1.02e-08,48;CL:0000234,1.02e-08,48;CL:0000860,1.30e-07,42;CL:0002057,1.30e-07,42;CL:0000763,3.22e-07,108;CL:0000049,3.22e-07,108;CL:0002009,4.85e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.86e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;3.86e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.39e-36!115;UBERON:0001049!1.21e-18!57;UBERON:0005068!1.21e-18!57;UBERON:0006241!1.21e-18!57;UBERON:0007135!1.21e-18!57;UBERON:0003080!4.77e-14!42;UBERON:0002780!8.59e-14!41;UBERON:0001890!8.59e-14!41;UBERON:0006240!8.59e-14!41;UBERON:0002616!1.22e-13!59;UBERON:0001017!1.59e-12!82;UBERON:0000955!7.24e-12!69;UBERON:0006238!7.24e-12!69;UBERON:0001893!1.25e-11!34;UBERON:0002020!1.33e-11!34;UBERON:0003528!1.33e-11!34;UBERON:0005743!3.39e-11!86;UBERON:0002791!4.30e-11!33;UBERON:0003075!1.23e-10!86;UBERON:0007284!1.23e-10!86;UBERON:0001869!1.99e-10!32;UBERON:0002390!3.09e-10!102;UBERON:0003061!3.09e-10!102;UBERON:0002619!3.86e-10!22;UBERON:0002346!5.22e-10!90;UBERON:0000073!1.75e-09!94;UBERON:0001016!1.75e-09!94;UBERON:0001950!4.96e-09!20;UBERON:0002193!5.57e-09!112;UBERON:0003056!1.29e-07!61;UBERON:0000956!1.35e-07!25;UBERON:0000203!1.35e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!4.39e-36!115;UBERON:0001049!1.21e-18!57;UBERON:0005068!1.21e-18!57;UBERON:0006241!1.21e-18!57;UBERON:0007135!1.21e-18!57;UBERON:0003080!4.77e-14!42;UBERON:0002780!8.59e-14!41;UBERON:0001890!8.59e-14!41;UBERON:0006240!8.59e-14!41;UBERON:0002616!1.22e-13!59;UBERON:0001017!1.59e-12!82;UBERON:0000955!7.24e-12!69;UBERON:0006238!7.24e-12!69;UBERON:0001893!1.25e-11!34;UBERON:0002020!1.33e-11!34;UBERON:0003528!1.33e-11!34;UBERON:0005743!3.39e-11!86;UBERON:0002791!4.30e-11!33;UBERON:0003075!1.23e-10!86;UBERON:0007284!1.23e-10!86;UBERON:0001869!1.99e-10!32;UBERON:0002390!3.09e-10!102;UBERON:0003061!3.09e-10!102;UBERON:0002619!3.86e-10!22;UBERON:0002346!5.22e-10!90;UBERON:0000073!1.75e-09!94;UBERON:0001016!1.75e-09!94;UBERON:0001950!4.96e-09!20;UBERON:0002193!5.57e-09!112;UBERON:0003056!1.29e-07!61;UBERON:0000956!1.35e-07!25;UBERON:0000203!1.35e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.68e-11;41!UBERON:0001890;1.68e-11;41!UBERON:0001893;3.08e-11;34!UBERON:0003528;6.13e-11;34!UBERON:0002020;6.13e-11;34!UBERON:0000073;9.14e-11;53!UBERON:0002616;9.14e-11;53!UBERON:0002619;1.59e-10;22!UBERON:0002791;1.59e-10;32!UBERON:0001869;1.70e-10;32!UBERON:0007023;3.89e-10;114!UBERON:0001950;3.13e-09;20!UBERON:0000956;2.90e-08;25!UBERON:0000203;2.90e-08;25 | |ontology_enrichment_uberon_v019=UBERON:0002780;1.68e-11;41!UBERON:0001890;1.68e-11;41!UBERON:0001893;3.08e-11;34!UBERON:0003528;6.13e-11;34!UBERON:0002020;6.13e-11;34!UBERON:0000073;9.14e-11;53!UBERON:0002616;9.14e-11;53!UBERON:0002619;1.59e-10;22!UBERON:0002791;1.59e-10;32!UBERON:0001869;1.70e-10;32!UBERON:0007023;3.89e-10;114!UBERON:0001950;3.13e-09;20!UBERON:0000956;2.90e-08;25!UBERON:0000203;2.90e-08;25 | ||
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| ||
|short_description=p2@TESK2 | |short_description=p2@TESK2 | ||
}} | }} |
Latest revision as of 07:40, 18 September 2015
Short description: | p2@TESK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TESK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000538496_5end |
EntrezGene: | TESK2 |
HGNC: | 11732 |
UniProt: | F5GWP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.35e-12 | 120 |
leukocyte | 9.74e-12 | 136 |
myeloid leukocyte | 4.03e-10 | 72 |
hematopoietic oligopotent progenitor cell | 5.83e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.83e-10 | 161 |
hematopoietic stem cell | 1.51e-09 | 168 |
myeloid lineage restricted progenitor cell | 1.89e-09 | 66 |
granulocyte monocyte progenitor cell | 3.93e-09 | 67 |
nongranular leukocyte | 6.65e-09 | 115 |
hematopoietic cell | 7.38e-09 | 177 |
defensive cell | 1.02e-08 | 48 |
phagocyte | 1.02e-08 | 48 |
classical monocyte | 1.30e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.30e-07 | 42 |
myeloid cell | 3.22e-07 | 108 |
common myeloid progenitor | 3.22e-07 | 108 |
macrophage dendritic cell progenitor | 4.85e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.14e-39 | 114 |
neural tube | 5.34e-21 | 56 |
neural rod | 5.34e-21 | 56 |
future spinal cord | 5.34e-21 | 56 |
neural keel | 5.34e-21 | 56 |
regional part of nervous system | 6.73e-19 | 53 |
regional part of brain | 6.73e-19 | 53 |
regional part of forebrain | 1.32e-15 | 41 |
forebrain | 1.32e-15 | 41 |
anterior neural tube | 1.32e-15 | 41 |
future forebrain | 1.32e-15 | 41 |
central nervous system | 1.12e-14 | 81 |
brain | 3.48e-13 | 68 |
future brain | 3.48e-13 | 68 |
telencephalon | 5.03e-13 | 34 |
brain grey matter | 5.42e-13 | 34 |
gray matter | 5.42e-13 | 34 |
neural plate | 2.63e-12 | 82 |
presumptive neural plate | 2.63e-12 | 82 |
nervous system | 2.64e-12 | 89 |
regional part of telencephalon | 1.11e-11 | 32 |
cerebral hemisphere | 1.31e-11 | 32 |
neurectoderm | 3.10e-11 | 86 |
regional part of cerebral cortex | 1.58e-10 | 22 |
hematopoietic system | 8.63e-10 | 98 |
blood island | 8.63e-10 | 98 |
ecto-epithelium | 1.09e-09 | 104 |
neocortex | 3.09e-09 | 20 |
pre-chordal neural plate | 3.65e-09 | 61 |
cerebral cortex | 2.88e-08 | 25 |
pallium | 2.88e-08 | 25 |
hemolymphoid system | 3.05e-08 | 108 |
organ system subdivision | 2.17e-07 | 223 |