FFCP PHASE1:Hg19::chr11:5255903..5255912,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:5255903..5255912,-
|short_description=p7@HBD
|description=CAGE_peak_7_at_HBD_5end
|association_with_transcript=-25bp_to_ENST00000380299_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3045 | |EntrezGene=3045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4829 | |HGNC=4829 | ||
|TSSclassifier=strong | |||
|UniProt=P02042 | |UniProt=P02042 | ||
|association_with_transcript=-25bp_to_ENST00000380299_5end | |||
|cluster_id=chr11:5255903..5255912,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_7_at_HBD_5end | |||
|id=chr11:5255903..5255912,- | |||
|ontology_enrichment_celltype=CL:0000764!1.11e-34!2;CL:0000765!1.11e-34!2;CL:0000050!1.11e-34!2;CL:0000038!1.11e-34!2;CL:0000558!1.11e-34!2;CL:0000547!1.11e-34!2;CL:0000549!1.11e-34!2;CL:0000550!1.11e-34!2;CL:0000552!1.11e-34!2;CL:0000037!5.08e-07!172;CL:0000566!5.08e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.61e-131;2!CL:0000558;4.61e-131;2!CL:0002563;1.03e-17;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.61e-131,2;CL:0000765,4.61e-131,2;CL:0000050,4.61e-131,2;CL:0000038,4.61e-131,2;CL:0000558,4.61e-131,2;CL:0000547,4.61e-131,2;CL:0000549,4.61e-131,2;CL:0000550,4.61e-131,2;CL:0000552,4.61e-131,2;CL:0002563,1.03e-17,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!7.37e-18!1;DOID:0060061!7.37e-18!1;DOID:8691!7.37e-18!1;DOID:4960!1.22e-17!1;DOID:0070004!1.22e-17!1;DOID:2531!1.84e-11!51;DOID:0060083!1.84e-11!51;DOID:1036!3.27e-09!8;DOID:8692!7.48e-09!31;DOID:1240!4.36e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.03e-17;4!UBERON:0001262;1.03e-17;4!UBERON:0004786;1.03e-17;4!UBERON:0004808;1.03e-17;4!UBERON:0001277;1.03e-17;4!UBERON:0000485;9.89e-11;7!UBERON:0003929;9.89e-11;7!UBERON:0003350;1.47e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.03e-17,4;UBERON:0001262,1.03e-17,4;UBERON:0004786,1.03e-17,4;UBERON:0004808,1.03e-17,4;UBERON:0001277,1.03e-17,4;UBERON:0003350,1.47e-09,8;UBERON:0000485,1.21e-08,9 | |||
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|short_description=p7@HBD | |||
}} | }} |
Latest revision as of 07:43, 18 September 2015
Short description: | p7@HBD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HBD_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -25bp_to_ENST00000380299_5end |
EntrezGene: | HBD |
HGNC: | 4829 |
UniProt: | P02042 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.61e-131 | 2 |
erythroblast | 4.61e-131 | 2 |
megakaryocyte-erythroid progenitor cell | 4.61e-131 | 2 |
erythroid progenitor cell | 4.61e-131 | 2 |
reticulocyte | 4.61e-131 | 2 |
proerythroblast | 4.61e-131 | 2 |
basophilic erythroblast | 4.61e-131 | 2 |
polychromatophilic erythroblast | 4.61e-131 | 2 |
orthochromatic erythroblast | 4.61e-131 | 2 |
intestinal epithelial cell | 1.03e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.03e-17 | 4 |
wall of intestine | 1.03e-17 | 4 |
gastrointestinal system mucosa | 1.03e-17 | 4 |
gastrointestinal system epithelium | 1.03e-17 | 4 |
intestinal epithelium | 1.03e-17 | 4 |
epithelium of mucosa | 1.47e-09 | 8 |
simple columnar epithelium | 1.21e-08 | 9 |