FFCP PHASE1:Hg19::chr17:79670440..79670524,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1468,6182 | |EntrezGene=1468,6182 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10378,10980 | |HGNC=10378,10980 | ||
|TSSclassifier=strong | |||
|UniProt=F8W9G5 | |UniProt=F8W9G5 | ||
|association_with_transcript=0bp_to_ENST00000332396_5end | |association_with_transcript=0bp_to_ENST00000332396_5end | ||
|cluster_id=chr17:79670440..79670524,+ | |||
|coexpression_cluster_id=C2145 | |coexpression_cluster_id=C2145 | ||
|description=CAGE_peak_1_at_MRPL12_5end,CAGE_peak_1_at_SLC25A10_5end | |description=CAGE_peak_1_at_MRPL12_5end,CAGE_peak_1_at_SLC25A10_5end | ||
|id=chr17:79670440..79670524,+ | |id=chr17:79670440..79670524,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000066!1.28e-25!254;CL:0002321!1.48e-16!248;CL:0000220!6.29e-16!246;CL:0000548!2.51e-07!679;CL:0000004!2.51e-07!679;CL:0000255!2.51e-07!679;CL:0000012!3.23e-07!682;CL:0000076!9.39e-07!62 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:8692;1.80e-10;31!DOID:1240;9.26e-09;39!DOID:2531;1.49e-08;51!DOID:0060083;1.49e-08;51 | |ontology_enrichment_celltype_v019_2=CL:0000066,7.50e-26,253;CL:0002321,1.26e-16,250;CL:0000076,8.99e-07,63 | ||
|ontology_enrichment_uberon=UBERON:0000072;9.82e-09;37 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.29e-30!235;DOID:14566!4.85e-29!239;DOID:0050687!4.90e-18!143;DOID:305!1.32e-13!106;DOID:2531!2.57e-13!51;DOID:0060083!2.57e-13!51;DOID:0050686!4.09e-13!137;DOID:1240!3.53e-11!39;DOID:8692!9.16e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.80e-10;31!DOID:1240;9.26e-09;39!DOID:2531;1.49e-08;51!DOID:0060083;1.49e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.29e-30,235;DOID:14566,4.85e-29,239;DOID:0050687,4.90e-18,143;DOID:305,1.32e-13,106;DOID:2531,2.57e-13,51;DOID:0060083,2.57e-13,51;DOID:0050686,4.09e-13,137;DOID:1240,3.53e-11,39;DOID:8692,9.16e-11,31 | |||
|ontology_enrichment_uberon=UBERON:0003104!5.15e-14!238;UBERON:0009142!5.15e-14!238;UBERON:0000481!1.12e-09!347;UBERON:0001041!1.50e-09!98;UBERON:0000072!2.78e-09!46;UBERON:0001048!1.95e-08!168;UBERON:0008947!2.54e-08!38;UBERON:0003258!2.54e-08!38;UBERON:0005177!3.04e-08!107;UBERON:0002100!4.75e-08!216;UBERON:0000077!1.24e-07!130;UBERON:0003914!1.70e-07!118;UBERON:0004921!2.46e-07!129;UBERON:0004185!2.46e-07!129;UBERON:0000490!5.47e-07!138;UBERON:0000065!6.39e-07!53;UBERON:0000063!6.40e-07!97;UBERON:0000119!9.27e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;9.82e-09;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,3.42e-09,87;UBERON:0002100,4.46e-09,199;UBERON:0005177,4.75e-09,101;UBERON:0000072,6.22e-09,47;UBERON:0008947,2.54e-08,38;UBERON:0003258,2.54e-08,38;UBERON:0000490,3.53e-08,148;UBERON:0003104,4.52e-08,160;UBERON:0009142,4.52e-08,160;UBERON:0001048,8.11e-08,160;UBERON:0003914,1.18e-07,117;UBERON:0000119,6.51e-07,309;UBERON:0004921,7.20e-07,118;UBERON:0000483,8.81e-07,306 | |||
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| ||
|short_description=p1@MRPL12,p1@SLC25A10 | |short_description=p1@MRPL12,p1@SLC25A10 | ||
}} | }} |
Latest revision as of 08:13, 18 September 2015
Short description: | p1@MRPL12, p1@SLC25A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPL12_5end, CAGE_peak_1_at_SLC25A10_5end |
Coexpression cluster: | C2145_Mesenchymal_Alveolar_Renal_Placental_nonsmall_Bronchial_left |
Association with transcript: | 0bp_to_ENST00000332396_5end |
EntrezGene: | 1468,6182 |
HGNC: | 10980&submit=Submit 10378, 10980 |
UniProt: | F8W9G5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.50e-26 | 253 |
embryonic cell | 1.26e-16 | 250 |
squamous epithelial cell | 8.99e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
foregut | 3.42e-09 | 87 |
trunk | 4.46e-09 | 199 |
trunk region element | 4.75e-09 | 101 |
segment of respiratory tract | 6.22e-09 | 47 |
respiratory primordium | 2.54e-08 | 38 |
endoderm of foregut | 2.54e-08 | 38 |
unilaminar epithelium | 3.53e-08 | 148 |
mesenchyme | 4.52e-08 | 160 |
entire embryonic mesenchyme | 4.52e-08 | 160 |
primordium | 8.11e-08 | 160 |
epithelial tube | 1.18e-07 | 117 |
cell layer | 6.51e-07 | 309 |
subdivision of digestive tract | 7.20e-07 | 118 |
epithelium | 8.81e-07 | 306 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.29e-30 | 235 |
disease of cellular proliferation | 4.85e-29 | 239 |
cell type cancer | 4.90e-18 | 143 |
carcinoma | 1.32e-13 | 106 |
hematologic cancer | 2.57e-13 | 51 |
immune system cancer | 2.57e-13 | 51 |
organ system cancer | 4.09e-13 | 137 |
leukemia | 3.53e-11 | 39 |
myeloid leukemia | 9.16e-11 | 31 |