FFCP PHASE1:Hg19::chr8:42623839..42623845,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8973 | |EntrezGene=8973 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15963 | |HGNC=15963 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_ENST00000529467_5end | |association_with_transcript=-48bp_to_ENST00000529467_5end | ||
|cluster_id=chr8:42623839..42623845,- | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_8_at_CHRNA6_5end | |description=CAGE_peak_8_at_CHRNA6_5end | ||
|id=chr8:42623839..42623845,- | |id=chr8:42623839..42623845,- | ||
|ontology_enrichment_celltype=CL:0000945!2.86e-32!24;CL:0000826!2.86e-32!24;CL:0000838!1.05e-22!52;CL:0000542!2.95e-22!53;CL:0000051!2.95e-22!53;CL:0000946!6.65e-14!1;CL:0000786!6.65e-14!1;CL:0000980!6.65e-14!1;CL:0002087!3.65e-09!119;CL:0002031!9.52e-09!124;CL:0000738!1.31e-07!140;CL:0000785!1.36e-07!2;CL:0000955!1.36e-07!2;CL:0000818!1.36e-07!2;CL:0000954!1.36e-07!2;CL:0000816!1.36e-07!2 | |ontology_enrichment_celltype=CL:0000945!2.86e-32!24;CL:0000826!2.86e-32!24;CL:0000838!1.05e-22!52;CL:0000542!2.95e-22!53;CL:0000051!2.95e-22!53;CL:0000946!6.65e-14!1;CL:0000786!6.65e-14!1;CL:0000980!6.65e-14!1;CL:0002087!3.65e-09!119;CL:0002031!9.52e-09!124;CL:0000738!1.31e-07!140;CL:0000785!1.36e-07!2;CL:0000955!1.36e-07!2;CL:0000818!1.36e-07!2;CL:0000954!1.36e-07!2;CL:0000816!1.36e-07!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.65e-15;7 | |||
|ontology_enrichment_disease=DOID:0060058!2.70e-31!10;DOID:2355!5.15e-14!1;DOID:2531!1.43e-08!51;DOID:0060083!1.43e-08!51;DOID:74!1.20e-07!2 | |ontology_enrichment_disease=DOID:0060058!2.70e-31!10;DOID:2355!5.15e-14!1;DOID:2531!1.43e-08!51;DOID:0060083!1.43e-08!51;DOID:74!1.20e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.07e-13;8!DOID:0060058;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.07e-13,8;DOID:0060058,2.73e-11,10;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0001000!5.85e-14!1;UBERON:0005352!5.85e-14!1 | |ontology_enrichment_uberon=UBERON:0001000!5.85e-14!1;UBERON:0005352!5.85e-14!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.27e-34;3!UBERON:0004177;4.21e-21;5!UBERON:0005057;4.21e-21;5!UBERON:0002075;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.27e-34,3;UBERON:0004854,4.27e-34,3;UBERON:0009034,4.27e-34,3;UBERON:0002095,4.27e-34,3;UBERON:0004782,4.27e-34,3;UBERON:0003281,4.27e-34,3;UBERON:0009664,4.27e-34,3;UBERON:0002296,4.27e-34,3;UBERON:0005602,4.27e-34,3;UBERON:0001179,4.27e-34,3;UBERON:0006293,4.27e-34,3;UBERON:0004177,1.65e-15,7;UBERON:0005057,1.65e-15,7;UBERON:0000945,9.39e-14,8;UBERON:0010039,9.39e-14,8;UBERON:0004457,1.22e-09,12;UBERON:0000042,1.22e-09,12;UBERON:0003887,1.22e-09,12;UBERON:0002075,7.18e-07,18 | |||
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|short_description=p8@CHRNA6 | |short_description=p8@CHRNA6 | ||
}} | }} |
Latest revision as of 08:22, 18 September 2015
Short description: | p8@CHRNA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CHRNA6_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | -48bp_to_ENST00000529467_5end |
EntrezGene: | CHRNA6 |
HGNC: | 15963 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 4.27e-34 | 3 |
gastrointestinal system mesentery | 4.27e-34 | 3 |
stomach region | 4.27e-34 | 3 |
mesentery | 4.27e-34 | 3 |
gastrointestinal system serosa | 4.27e-34 | 3 |
mesentery of stomach | 4.27e-34 | 3 |
gut mesentery | 4.27e-34 | 3 |
dorsal mesentery | 4.27e-34 | 3 |
dorsal mesogastrium | 4.27e-34 | 3 |
peritoneal cavity | 4.27e-34 | 3 |
spleen primordium | 4.27e-34 | 3 |
hemopoietic organ | 1.65e-15 | 7 |
immune organ | 1.65e-15 | 7 |
stomach | 9.39e-14 | 8 |
food storage organ | 9.39e-14 | 8 |
cavity lining | 1.22e-09 | 12 |
serous membrane | 1.22e-09 | 12 |
intraembryonic coelom | 1.22e-09 | 12 |
viscus | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.07e-13 | 8 |
lymphoma | 2.73e-11 | 10 |
hematologic cancer | 4.95e-09 | 51 |
immune system cancer | 4.95e-09 | 51 |