FFCP PHASE1:Hg19::chr10:48439044..48439053,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2662 | |EntrezGene=2662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4215 | |HGNC=4215 | ||
|TSSclassifier=strong | |||
|UniProt=P55107 | |UniProt=P55107 | ||
|association_with_transcript=-68bp_to_ENST00000224605_5end | |association_with_transcript=-68bp_to_ENST00000224605_5end | ||
|cluster_id=chr10:48439044..48439053,- | |||
|description=CAGE_peak_5_at_GDF10_5end | |description=CAGE_peak_5_at_GDF10_5end | ||
|id=chr10:48439044..48439053,- | |id=chr10:48439044..48439053,- | ||
|ontology_enrichment_celltype=CL:0002603!9.35e-11!3;CL:0000064!5.15e-10!3;CL:0005012!5.15e-10!3;CL:0000067!5.15e-10!3;CL:0002304!5.15e-10!3 | |ontology_enrichment_celltype=CL:0002603!9.35e-11!3;CL:0000064!5.15e-10!3;CL:0005012!5.15e-10!3;CL:0000067!5.15e-10!3;CL:0002304!5.15e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0002603;6.91e-39;3!CL:0000128;2.46e-17;7!CL:0000126;2.46e-17;7!CL:0000127;2.46e-17;7!CL:0000064;9.90e-11;3!CL:0000067;9.90e-11;3!CL:0005012;9.90e-11;3!CL:0002304;9.90e-11;3!CL:0000243;1.02e-07;15!CL:0000125;1.02e-07;15!CL:0000095;5.33e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,6.91e-39,3;CL:0000128,2.46e-17,7;CL:0000126,2.46e-17,7;CL:0000127,2.46e-17,7;CL:0002453,2.46e-17,7;CL:0000064,8.99e-11,3;CL:0000067,8.99e-11,3;CL:0005012,8.99e-11,3;CL:0002304,8.99e-11,3;CL:0000243,1.02e-07,15;CL:0000125,1.02e-07,15;CL:0000030,1.02e-07,15;CL:0000339,1.02e-07,15;CL:0000095,5.34e-07,17;CL:0000123,5.34e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000339;1.02e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;4.86e-20;6!UBERON:0001905;2.05e-15;2!UBERON:0002757;2.05e-15;2!UBERON:0010134;2.05e-15;2!UBERON:0005408;2.05e-15;2!UBERON:0001899;2.05e-15;2!UBERON:0002680;1.02e-13;9!UBERON:0001895;1.02e-13;9!UBERON:0001778;9.90e-11;3!UBERON:0001775;9.90e-11;3!UBERON:0004733;1.53e-10;12!UBERON:0002028;1.53e-10;12!UBERON:0004732;8.34e-10;13!UBERON:0002346;2.26e-08;4!UBERON:0003296;2.26e-08;4!UBERON:0010133;2.26e-08;4!UBERON:0000923;2.26e-08;4!UBERON:0010316;2.26e-08;4!UBERON:0000488;2.26e-08;4!UBERON:0002784;2.26e-08;4!UBERON:0005291;2.26e-08;4!UBERON:0002050;6.04e-07;5!UBERON:0005423;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.86e-20,6;UBERON:0006215,4.86e-20,6;UBERON:0001905,2.74e-15,2;UBERON:0002757,2.74e-15,2;UBERON:0010134,2.74e-15,2;UBERON:0005408,2.74e-15,2;UBERON:0001899,2.74e-15,2;UBERON:0002680,1.02e-13,9;UBERON:0001895,1.02e-13,9;UBERON:0010092,1.02e-13,9;UBERON:0001778,8.99e-11,3;UBERON:0001775,8.99e-11,3;UBERON:0004733,1.53e-10,12;UBERON:0002028,1.53e-10,12;UBERON:0007277,1.53e-10,12;UBERON:0004732,8.34e-10,13;UBERON:0003076,1.27e-08,15;UBERON:0003057,1.27e-08,15;UBERON:0002346,1.81e-08,86;UBERON:0000488,2.11e-08,4;UBERON:0003296,2.61e-08,4;UBERON:0010133,2.61e-08,4;UBERON:0002784,2.61e-08,4 | |||
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| ||
|short_description=p5@GDF10 | |short_description=p5@GDF10 | ||
}} | }} |
Latest revision as of 08:27, 18 September 2015
Short description: | p5@GDF10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GDF10_5end |
Coexpression cluster: | NA |
Association with transcript: | -68bp_to_ENST00000224605_5end |
EntrezGene: | GDF10 |
HGNC: | 4215 |
UniProt: | P55107 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 6.91e-39 | 3 |
oligodendrocyte | 2.46e-17 | 7 |
macroglial cell | 2.46e-17 | 7 |
astrocyte | 2.46e-17 | 7 |
oligodendrocyte precursor cell | 2.46e-17 | 7 |
ciliated cell | 8.99e-11 | 3 |
ciliated epithelial cell | 8.99e-11 | 3 |
multi-ciliated epithelial cell | 8.99e-11 | 3 |
non-pigmented ciliary epithelial cell | 8.99e-11 | 3 |
glial cell (sensu Vertebrata) | 1.02e-07 | 15 |
glial cell | 1.02e-07 | 15 |
glioblast | 1.02e-07 | 15 |
glioblast (sensu Vertebrata) | 1.02e-07 | 15 |
neuron associated cell | 5.34e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.34e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.86e-20 | 6 |
rhombic lip | 4.86e-20 | 6 |
pineal body | 2.74e-15 | 2 |
regional part of epithalamus | 2.74e-15 | 2 |
secretory circumventricular organ | 2.74e-15 | 2 |
circumventricular organ | 2.74e-15 | 2 |
epithalamus | 2.74e-15 | 2 |
regional part of metencephalon | 1.02e-13 | 9 |
metencephalon | 1.02e-13 | 9 |
future metencephalon | 1.02e-13 | 9 |
ciliary epithelium | 8.99e-11 | 3 |
ciliary body | 8.99e-11 | 3 |
segmental subdivision of hindbrain | 1.53e-10 | 12 |
hindbrain | 1.53e-10 | 12 |
presumptive hindbrain | 1.53e-10 | 12 |
segmental subdivision of nervous system | 8.34e-10 | 13 |
posterior neural tube | 1.27e-08 | 15 |
chordal neural plate | 1.27e-08 | 15 |
neurectoderm | 1.81e-08 | 86 |
atypical epithelium | 2.11e-08 | 4 |
gland of diencephalon | 2.61e-08 | 4 |
neuroendocrine gland | 2.61e-08 | 4 |
regional part of diencephalon | 2.61e-08 | 4 |