FFCP PHASE1:Hg19::chr2:176957417..176957431,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr2:176957417..176957431,+ to FFCP PHASE1:Hg19::chr2:176957417..176957431,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3239 | |EntrezGene=3239 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5136 | |HGNC=5136 | ||
|TSSclassifier=strong | |||
|UniProt=P35453 | |UniProt=P35453 | ||
|association_with_transcript=-100bp_to_NM_000523,uc002ukf.1_5end | |||
|cluster_id=chr2:176957417..176957431,+ | |||
|description=CAGE_peak_2_at_HOXD13_5end | |||
|id=chr2:176957417..176957431,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;6.22e-15;1!CL:0000333;1.58e-11;5!CL:0002253;4.09e-08;2!CL:0000047;7.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,5.42e-15,1;CL:0002253,4.09e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.40e-17!143;DOID:14566!2.11e-16!239;DOID:162!3.59e-16!235;DOID:3095!7.80e-12!22;DOID:2994!7.80e-12!22;DOID:305!1.07e-10!106;DOID:1115!3.79e-07!20;DOID:171!6.46e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.10e-33;10!DOID:3095;1.57e-21;22!DOID:2994;1.57e-21;22!DOID:1115;6.08e-11;20!DOID:169;9.26e-10;6!DOID:3193;5.37e-08;2!DOID:962;5.37e-08;2!DOID:154;7.52e-08;2!DOID:4236;7.52e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.57e-33,10;DOID:3095,1.76e-21,22;DOID:2994,1.76e-21,22;DOID:1115,5.92e-11,20;DOID:0050687,5.27e-10,143;DOID:169,1.01e-09,6;DOID:162,1.70e-09,235;DOID:14566,2.89e-09,239;DOID:3193,5.74e-08,2;DOID:962,5.74e-08,2;DOID:154,7.03e-08,2;DOID:4236,7.03e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005910!5.04e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.66e-31;4!UBERON:0000923;4.66e-31;4!UBERON:0010316;4.66e-31;4!UBERON:0005291;4.66e-31;4!UBERON:0002050;5.34e-25;5!UBERON:0005423;5.34e-25;5!UBERON:0000013;1.58e-11;5!UBERON:0002410;1.58e-11;5!UBERON:0003714;5.37e-08;2!UBERON:0000010;8.58e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.76e-11,5;UBERON:0002410,1.76e-11,5;UBERON:0003714,5.74e-08,2;UBERON:0000010,9.10e-07,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824125183365091,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,1.27541018183058,0,0,0,0.649243880549111,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,2.43410110628385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0.102268682502155,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0.1137934482855,0,1.65471377237555,0,1.74962768029953,1.56262495439963,0,0,0,0,0,0,0,0,0.307801034015188,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11138415509973,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622129148383483,0.664653872707185,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0.529536760149002,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0.574647645245373,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41539347670307,0,3.90384818894258,4.03892348193197,5.08136633461909,2.23457967189298,0,0,4.80342448971282,0,0,0,0,0,0,0,0,0,0,0,0.707818340086442,0,0,0,0,0.596748666348824,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0.549451649953598,0,0,0,0,0,0,0,0,2.43401581223611,0,0,0,0,0,0.118332000730565,0,0,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0.219881033490858,0.301925687133347,0,0,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0.473314686579554,0,0,0,0.371995018166751,0,0,0.126166424835079,0.109265571963696,0,0.203977659483963,0.26721740526556,1.56221329209236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488419611665847,0.747091421144008,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p2@HOXD13 | |||
}} | }} |
Latest revision as of 08:36, 18 September 2015
Short description: | p2@HOXD13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXD13_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_NM_000523, uc002ukf.1_5end |
EntrezGene: | HOXD13 |
HGNC: | 5136 |
UniProt: | P35453 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 5.42e-15 | 1 |
epithelial cell of large intestine | 4.09e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.76e-11 | 5 |
autonomic nervous system | 1.76e-11 | 5 |
neural tissue | 5.74e-08 | 2 |
peripheral nervous system | 9.10e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.57e-33 | 10 |
germ cell and embryonal cancer | 1.76e-21 | 22 |
germ cell cancer | 1.76e-21 | 22 |
sarcoma | 5.92e-11 | 20 |
cell type cancer | 5.27e-10 | 143 |
neuroendocrine tumor | 1.01e-09 | 6 |
cancer | 1.70e-09 | 235 |
disease of cellular proliferation | 2.89e-09 | 239 |
peripheral nerve sheath neoplasm | 5.74e-08 | 2 |
neurofibroma | 5.74e-08 | 2 |
mixed cell type cancer | 7.03e-08 | 2 |
carcinosarcoma | 7.03e-08 | 2 |