FFCP PHASE1:Hg19::chr12:4388020..4388039,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:4388020..4388039,+ to FFCP PHASE1:Hg19::chr12:4388020..4388039,+: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=894 | |EntrezGene=894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1583 | |HGNC=1583 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=54bp_to_ENST00000541542_5end | |||
|cluster_id=chr12:4388020..4388039,+ | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_9_at_CCND2_5end | |||
|id=chr12:4388020..4388039,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000317;4.03e-11;2!CL:1000448;4.03e-11;2!CL:0002308;4.03e-11;2!CL:0002140;4.03e-11;2!CL:0000622;1.08e-09;5!CL:0000235;5.88e-09;6!CL:0000840;6.88e-09;5!CL:0000154;3.73e-08;6!CL:0000785;8.19e-07;1!CL:0000819;8.19e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,5.51e-11,2;CL:1000448,5.51e-11,2;CL:0002308,5.51e-11,2;CL:0002140,5.51e-11,2;CL:0000622,1.10e-09,5;CL:0000235,5.97e-09,6;CL:0000840,6.81e-09,5;CL:0001029,6.81e-09,5;CL:0000154,3.79e-08,6;CL:0000819,8.67e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;8.19e-07;1!DOID:8675;8.19e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,8.67e-07,1;DOID:8675,8.67e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;4.03e-11;2!UBERON:0007771;4.03e-11;2!UBERON:0003297;4.03e-11;2!UBERON:0001821;4.03e-11;2!UBERON:0003487;4.03e-11;2!UBERON:0001820;4.03e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.51e-11,2;UBERON:0007771,5.51e-11,2;UBERON:0003297,5.51e-11,2;UBERON:0001821,5.51e-11,2;UBERON:0003487,5.51e-11,2;UBERON:0001820,5.51e-11,2;UBERON:0005089,5.51e-11,2;UBERON:0005088,5.51e-11,2 | |||
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| ||
|short_description=p9@CCND2 | |||
}} | }} |
Latest revision as of 08:37, 18 September 2015
Short description: | p9@CCND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CCND2_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | 54bp_to_ENST00000541542_5end |
EntrezGene: | CCND2 |
HGNC: | 1583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 5.51e-11 | 2 |
epithelial cell of sweat gland | 5.51e-11 | 2 |
epithelial cell of skin gland | 5.51e-11 | 2 |
acinar cell of sebaceous gland | 5.51e-11 | 2 |
acinar cell | 1.10e-09 | 5 |
macrophage | 5.97e-09 | 6 |
immature conventional dendritic cell | 6.81e-09 | 5 |
common dendritic progenitor | 6.81e-09 | 5 |
protein secreting cell | 3.79e-08 | 6 |
B-1 B cell | 8.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.51e-11 | 2 |
epidermis gland | 5.51e-11 | 2 |
gland of integumental system | 5.51e-11 | 2 |
sebaceous gland | 5.51e-11 | 2 |
skin sebaceous gland | 5.51e-11 | 2 |
sweat gland | 5.51e-11 | 2 |
sweat gland placode | 5.51e-11 | 2 |
sebaceous gland placode | 5.51e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 8.67e-07 | 1 |
lymphosarcoma | 8.67e-07 | 1 |