FFCP PHASE1:Hg19::chr11:57004898..57004918,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr11:57004898..57004918,- to FFCP PHASE1:Hg19::chr11:57004898..57004918,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=187 | |EntrezGene=187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=339 | |HGNC=339 | ||
|TSSclassifier=strong | |||
|UniProt=B2RDH3,B3KQN4,P35414 | |UniProt=B2RDH3,B3KQN4,P35414 | ||
|association_with_transcript=8bp_to_NM_005161,NR_027991,uc001njn.3,uc001njo.2_5end | |||
|cluster_id=chr11:57004898..57004918,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_5_at_APLNR_5end | |||
|id=chr11:57004898..57004918,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;7.47e-20;7!UBERON:0006241;2.74e-12;3!UBERON:0003057;2.74e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.54e-35!115;UBERON:0001049!1.14e-22!57;UBERON:0005068!1.14e-22!57;UBERON:0006241!1.14e-22!57;UBERON:0007135!1.14e-22!57;UBERON:0002616!1.67e-19!59;UBERON:0002780!2.09e-17!41;UBERON:0001890!2.09e-17!41;UBERON:0006240!2.09e-17!41;UBERON:0000955!2.94e-17!69;UBERON:0006238!2.94e-17!69;UBERON:0003080!6.69e-17!42;UBERON:0001017!1.16e-16!82;UBERON:0003075!5.90e-16!86;UBERON:0007284!5.90e-16!86;UBERON:0005743!1.30e-15!86;UBERON:0002346!5.68e-15!90;UBERON:0002619!4.31e-14!22;UBERON:0002020!5.18e-14!34;UBERON:0003528!5.18e-14!34;UBERON:0000073!1.42e-13!94;UBERON:0001016!1.42e-13!94;UBERON:0001950!8.75e-13!20;UBERON:0002791!1.66e-12!33;UBERON:0000956!3.44e-12!25;UBERON:0000203!3.44e-12!25;UBERON:0001893!4.60e-12!34;UBERON:0001869!6.90e-11!32;UBERON:0001872!1.86e-10!5;UBERON:0003056!1.94e-10!61;UBERON:0000153!2.14e-10!129;UBERON:0007811!2.14e-10!129;UBERON:0002298!1.73e-09!8;UBERON:0000988!1.77e-09!3;UBERON:0000033!3.63e-09!123;UBERON:0001897!9.91e-08!2;UBERON:0001894!1.12e-07!7;UBERON:0006222!1.12e-07!7;UBERON:0000025!1.44e-07!194;UBERON:0004121!3.82e-07!169;UBERON:0002148!4.56e-07!2;UBERON:0009662!4.56e-07!2;UBERON:0004111!5.19e-07!241;UBERON:0003076!5.41e-07!15;UBERON:0003057!5.41e-07!15;UBERON:0000477!5.41e-07!286;UBERON:0000924!7.69e-07!173;UBERON:0006601!7.69e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.09e-44;3!UBERON:0004177;2.54e-27;5!UBERON:0005057;2.54e-27;5!UBERON:0002240;2.74e-12;3!UBERON:0001723;2.74e-12;3!UBERON:0005174;2.74e-12;3!UBERON:0002114;2.74e-12;2!UBERON:0001033;2.74e-12;3!UBERON:0001137;2.74e-12;3!UBERON:0002075;2.38e-08;18!UBERON:0002108;6.78e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.22e-44,3;UBERON:0004854,1.22e-44,3;UBERON:0009034,1.22e-44,3;UBERON:0002095,1.22e-44,3;UBERON:0004782,1.22e-44,3;UBERON:0003281,1.22e-44,3;UBERON:0009664,1.22e-44,3;UBERON:0002296,1.22e-44,3;UBERON:0005602,1.22e-44,3;UBERON:0001179,1.22e-44,3;UBERON:0006293,1.22e-44,3;UBERON:0004177,7.84e-20,7;UBERON:0005057,7.84e-20,7;UBERON:0000945,1.71e-17,8;UBERON:0010039,1.71e-17,8;UBERON:0002240,2.31e-12,3;UBERON:0005174,2.31e-12,3;UBERON:0001137,2.31e-12,3;UBERON:0002114,2.59e-12,2;UBERON:0001723,3.24e-12,3;UBERON:0001033,3.24e-12,3;UBERON:0010056,3.24e-12,3;UBERON:0005409,3.51e-12,25;UBERON:0004457,5.08e-12,12;UBERON:0000042,5.08e-12,12;UBERON:0003887,5.08e-12,12;UBERON:0002075,2.42e-08,18;UBERON:0002108,6.55e-08,4 | |||
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| ||
|short_description=p5@APLNR | |||
}} | }} |
Latest revision as of 08:39, 18 September 2015
Short description: | p5@APLNR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APLNR_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 8bp_to_NM_005161, NR_027991, uc001njn.3, uc001njo.2_5end |
EntrezGene: | APLNR |
HGNC: | 339 |
UniProt: | B2RDH3B3KQN4P35414 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 1.22e-44 | 3 |
gastrointestinal system mesentery | 1.22e-44 | 3 |
stomach region | 1.22e-44 | 3 |
mesentery | 1.22e-44 | 3 |
gastrointestinal system serosa | 1.22e-44 | 3 |
mesentery of stomach | 1.22e-44 | 3 |
gut mesentery | 1.22e-44 | 3 |
dorsal mesentery | 1.22e-44 | 3 |
dorsal mesogastrium | 1.22e-44 | 3 |
peritoneal cavity | 1.22e-44 | 3 |
spleen primordium | 1.22e-44 | 3 |
hemopoietic organ | 7.84e-20 | 7 |
immune organ | 7.84e-20 | 7 |
stomach | 1.71e-17 | 8 |
food storage organ | 1.71e-17 | 8 |
spinal cord | 2.31e-12 | 3 |
dorsal region element | 2.31e-12 | 3 |
dorsum | 2.31e-12 | 3 |
duodenum | 2.59e-12 | 2 |
tongue | 3.24e-12 | 3 |
gustatory system | 3.24e-12 | 3 |
future tongue | 3.24e-12 | 3 |
gastrointestinal system | 3.51e-12 | 25 |
cavity lining | 5.08e-12 | 12 |
serous membrane | 5.08e-12 | 12 |
intraembryonic coelom | 5.08e-12 | 12 |
viscus | 2.42e-08 | 18 |
small intestine | 6.55e-08 | 4 |