FFCP PHASE1:Hg19::chr1:16344530..16344547,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27129 | |EntrezGene=27129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5249 | |HGNC=5249 | ||
|TSSclassifier=strong | |||
|UniProt=D3YTC6,F6SZA2 | |UniProt=D3YTC6,F6SZA2 | ||
|association_with_transcript=0bp_to_ENST00000411503,ENST00000442459,ENST00000545268_5end | |association_with_transcript=0bp_to_ENST00000411503,ENST00000442459,ENST00000545268_5end | ||
|cluster_id=chr1:16344530..16344547,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_HSPB7_5end | |description=CAGE_peak_1_at_HSPB7_5end | ||
|id=chr1:16344530..16344547,- | |id=chr1:16344530..16344547,- | ||
|ontology_enrichment_celltype=CL:0000055!3.83e-20!180;CL:0000680!2.37e-12!57;CL:0000056!2.37e-12!57;CL:0000355!2.37e-12!57;CL:0000187!6.78e-11!54;CL:0000057!9.02e-11!75;CL:0000136!1.04e-10!15;CL:0000183!6.03e-10!59;CL:0000192!5.51e-09!42;CL:0000514!5.51e-09!42;CL:0000393!1.69e-08!60;CL:0000211!1.69e-08!60;CL:0000359!1.05e-07!32;CL:0002620!4.85e-07!23 | |ontology_enrichment_celltype=CL:0000055!3.83e-20!180;CL:0000680!2.37e-12!57;CL:0000056!2.37e-12!57;CL:0000355!2.37e-12!57;CL:0000187!6.78e-11!54;CL:0000057!9.02e-11!75;CL:0000136!1.04e-10!15;CL:0000183!6.03e-10!59;CL:0000192!5.51e-09!42;CL:0000514!5.51e-09!42;CL:0000393!1.69e-08!60;CL:0000211!1.69e-08!60;CL:0000359!1.05e-07!32;CL:0002620!4.85e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.45e-10;13!CL:0000192;3.02e-07;43!CL:0000359;4.88e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.65e-12,58;CL:0000056,4.65e-12,58;CL:0000355,4.65e-12,58;CL:0000136,1.41e-11,15;CL:0000187,1.56e-10,55;CL:0000057,2.95e-09,76;CL:0000192,7.61e-09,43;CL:0000514,7.61e-09,43;CL:0000393,4.22e-08,61;CL:0000211,4.22e-08,61;CL:0000359,2.21e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;3.02e-07;43!CL:0000355;6.32e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.55e-17!115;UBERON:0000914!6.72e-16!83;UBERON:0002329!6.72e-16!83;UBERON:0003077!6.72e-16!83;UBERON:0003059!6.72e-16!83;UBERON:0007282!6.72e-16!83;UBERON:0009618!6.72e-16!83;UBERON:0007285!6.72e-16!83;UBERON:0004290!7.93e-16!70;UBERON:0002385!1.69e-15!63;UBERON:0001015!1.69e-15!63;UBERON:0000383!1.69e-15!63;UBERON:0001134!1.21e-14!61;UBERON:0002036!1.21e-14!61;UBERON:0003082!1.21e-14!61;UBERON:0000486!9.24e-12!82;UBERON:0000475!2.51e-11!365;UBERON:0000481!1.12e-10!347;UBERON:0000468!2.59e-09!659;UBERON:0005256!1.61e-08!143;UBERON:0007100!1.19e-07!27;UBERON:0003104!1.26e-07!238;UBERON:0009142!1.26e-07!238;UBERON:0004872!2.39e-07!84;UBERON:0002100!7.31e-07!216;UBERON:0000467!8.45e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.94e-11;31!UBERON:0001015;2.94e-11;31!UBERON:0000383;2.94e-11;31!UBERON:0001134;9.43e-08;16!UBERON:0002036;9.43e-08;16!UBERON:0002204;4.74e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.81e-17,114;UBERON:0002385,2.26e-15,64;UBERON:0001015,2.26e-15,64;UBERON:0000383,2.26e-15,64;UBERON:0007524,4.70e-15,73;UBERON:0003077,1.05e-14,72;UBERON:0007285,1.05e-14,72;UBERON:0002329,1.55e-14,71;UBERON:0003059,1.55e-14,71;UBERON:0007282,1.55e-14,71;UBERON:0004290,1.55e-14,71;UBERON:0009618,1.55e-14,71;UBERON:0001134,1.82e-14,62;UBERON:0002036,1.82e-14,62;UBERON:0003082,1.82e-14,62;UBERON:0007503,6.78e-12,78;UBERON:0000486,3.04e-11,83;UBERON:0003104,7.07e-10,160;UBERON:0009142,7.07e-10,160;UBERON:0005256,1.19e-09,122;UBERON:0000479,3.40e-08,773;UBERON:0002199,7.09e-07,46;UBERON:0002416,7.09e-07,46 | |||
|phase1_expression=2242.81959209502,1161.28124158469,457.537995695522,1229.90083675997,684.297435568178,285.254697380821,53.1929744153452,21.4784756965123,57.4608382039645,1.22866968250754,2.09340350391728,1.52908960491121,1.31883489114227,22.5254762387285,40.4304798388057,33.6162573225888,8.43772339233568,10.2243412654232,8.29485757943862,1.60057375499824,1.63200552995402,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.7185706553688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,11.2519054422307,209.273269230664,224.599383964879,138.038732569665,81.9144525462632,94.893799709014,0.0945348171640679,0.221729397462564,0.87834785693126,31.1730199684556,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,734.027572653985,38.1157840110385,21.8475148341811,15.4891775204359,25.5361235182817,111.014164828177,0,40.2068103919971,10.2699641681923,0.134710672069688,0.163461903113459,0,0,0.468642863667593,1.24864030732128,2.85235910772225,1.49448680551801,0.704606991862589,0.485618833104395,0.421352420106746,4.28723759635276,0.491337269247072,7.12947890112782,0,8.90160945402805,3.64064544775211,1.43723628363248,0.673344455816265,0.625592599359821,2.49357703935765,3.95079858792754,45.0537059824559,22.9864230127093,4.99101605904093,52.5611632568366,126.63953156941,99.3960616438345,60.3183103129649,58.0185739612411,255.579415725264,574.170501782955,211.645520630548,780.957596367007,128.488791090254,137.614598470238,7.59736467048416,205.195544474603,415.904661483699,91.2235986630423,0,0,0,0,0,0.232387885739037,0.518305275076852,0,0,137.675588450238,638.738251625535,150.567064274204,143.954057689913,255.545336511033,50.2803900169337,50.7439917135086,34.4645772733379,46.1028806021407,58.1738115726724,33.2178866755535,51.9100536416633,52.3911311884674,33.0882554973896,0.738155454624648,5.60967095213783,21.8134226005642,122.01723045,0,0,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0.352226082707465,0,0,0,0,0,0,0.936017060556951,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0.088048434013226,0.829312462163088,0.144119953416961,0.12624243342638,1.20645999155121,4.20187268114105,3.51652341630141,3.4214489204541,0.925447434329912,0.300343057843917,0,0,0,0,1.03417372606222,1641.64308646014,0.845302752556,39.3588412545608,27.0419335969552,7.9734286021264,14.1849132023278,1.3321108950805,29.3104886999202,4.88359444852299,1.64648067356154,1.62868092146868,19.1911652320975,0,83.4987074455053,108.941682325037,28.5922754780683,0,0,0,74.2837052023906,44.7961549753044,71.3184525203592,150.13821501428,176.504161070779,701.739914937151,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,45.3958519360818,34.011595432058,1.35632511849868,56.9840160594412,29.9760701179232,38.637091683314,21.4368789436665,24.9785262774007,6.82222512167955,6.2083842775503,22.5836703502048,27.1022677756304,5.90808578382963,0.979005787313703,9.26487244289311,0,0,0,0.606255142892519,3.32870879020994,5.14063498660456,2392.25548298865,541.106917813708,1149.022426609,493.848281231472,858.133056684862,499.773132993188,353.234998139079,3.70103265126373,16.6908021794339,25.6236726763085,0,66.8209676144766,0,0,0,2.29628896329214,4.91646153618136,5.24497659837697,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,14.4326444107871,31.2363258877731,41.1133636474412,225.077744523488,206.603787801152,21.2478249058584,0,89.9830007127293,16.4340221096607,2.61882649094895,2.30255512089194,2.61889487720608,6.1229539574916,35.3840733150718,6.90335682070417,53.9534136019228,0,0.192190067365106,0,0,101.801175296106,55.4069730421927,16.0318572136938,1.23213432070436,7.98459045475533,18.2685928335765,71.1645001359053,4.57999637574372,0.744316738719335,7.2767267685307,6.1001662055624,15.0979696873687,2.1396949401696,3.5002357271853,7.06453776179307,10.6124749974156,10.157870100234,3.65218447271628,4.44801459461295,20.6063417524911,0.842516912477962,3.90106991271672,2.43713489631284,6.33900880540533,5.45999645631943,2.2624869112594,23.731704490251,15.4382296192915,155.244720206445,181.957117380312,4.05142873986681,2.62357900818653,40.1762546386154,23.8564093536808,3.09865162785466,5.30622003154991,6.484436706866,33.1704077877563,18.4475753316711,621.711985951621,184.734434950505,0,0.349934720244983,0,0,0,43.7768673612023,0,0,0,0,0,0,0,0,0,0,0,0,1.49553699578462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.671028323677248,0.333698283423817,0,0,0,0,0,0,0,570.502850084755,0.36408156524854,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0.994147647766298,1.68803299692615,0,0,0,1199.47288927144,40.8900194986099,0,0,0,157.697070944536,0,0,0,190.480416284919,0,1072.47195489575,4.84666373047609,2.50473865036998,1.99613798001194,0,0,160.224906171089,0,0,0,1.03423011972439,0,1.56262495439963,0,0.60298219312704,7.62908681585416,15.1493586105778,11.821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| ||
|short_description=p1@HSPB7 | |short_description=p1@HSPB7 | ||
}} | }} |
Latest revision as of 08:39, 18 September 2015
Short description: | p1@HSPB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HSPB7_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000411503, ENST00000442459, ENST00000545268_5end |
EntrezGene: | HSPB7 |
HGNC: | 5249 |
UniProt: | D3YTC6F6SZA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.65e-12 | 58 |
myoblast | 4.65e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.65e-12 | 58 |
fat cell | 1.41e-11 | 15 |
muscle cell | 1.56e-10 | 55 |
fibroblast | 2.95e-09 | 76 |
smooth muscle cell | 7.61e-09 | 43 |
smooth muscle myoblast | 7.61e-09 | 43 |
electrically responsive cell | 4.22e-08 | 61 |
electrically active cell | 4.22e-08 | 61 |
vascular associated smooth muscle cell | 2.21e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.81e-17 | 114 |
muscle tissue | 2.26e-15 | 64 |
musculature | 2.26e-15 | 64 |
musculature of body | 2.26e-15 | 64 |
dense mesenchyme tissue | 4.70e-15 | 73 |
paraxial mesoderm | 1.05e-14 | 72 |
presumptive paraxial mesoderm | 1.05e-14 | 72 |
somite | 1.55e-14 | 71 |
presomitic mesoderm | 1.55e-14 | 71 |
presumptive segmental plate | 1.55e-14 | 71 |
dermomyotome | 1.55e-14 | 71 |
trunk paraxial mesoderm | 1.55e-14 | 71 |
skeletal muscle tissue | 1.82e-14 | 62 |
striated muscle tissue | 1.82e-14 | 62 |
myotome | 1.82e-14 | 62 |
epithelial vesicle | 6.78e-12 | 78 |
multilaminar epithelium | 3.04e-11 | 83 |
mesenchyme | 7.07e-10 | 160 |
entire embryonic mesenchyme | 7.07e-10 | 160 |
trunk mesenchyme | 1.19e-09 | 122 |
tissue | 3.40e-08 | 773 |
integument | 7.09e-07 | 46 |
integumental system | 7.09e-07 | 46 |