FFCP PHASE1:Hg19::chr1:16355004..16355024,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1187 | |EntrezGene=1187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2026 | |HGNC=2026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010obx.1,uc010oby.1_5end | |association_with_transcript=0bp_to_uc010obx.1,uc010oby.1_5end | ||
|cluster_id=chr1:16355004..16355024,+ | |||
|description=CAGE_peak_1_at_CLCNKA_5end | |description=CAGE_peak_1_at_CLCNKA_5end | ||
|id=chr1:16355004..16355024,+ | |id=chr1:16355004..16355024,+ | ||
|ontology_enrichment_celltype=CL:0002570;7.74e-16;8 | |ontology_enrichment_celltype=CL:0002580!1.53e-16!3;CL:0000136!1.22e-12!15;CL:0002570!6.11e-07!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0002570;7.74e-16;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002570,7.36e-16,8;CL:0000136,1.76e-14,15 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.96e-41;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001905;1.31e-27;2!UBERON:0002757;1.31e-27;2!UBERON:0010134;1.31e-27;2!UBERON:0005408;1.31e-27;2!UBERON:0001899;1.31e-27;2!UBERON:0002037;9.52e-21;6!UBERON:0003296;2.50e-14;4!UBERON:0010133;2.50e-14;4!UBERON:0002784;2.50e-14;4!UBERON:0002680;4.73e-14;9!UBERON:0001895;4.73e-14;9!UBERON:0004733;1.10e-10;12!UBERON:0002028;1.10e-10;12!UBERON:0004732;6.59e-10;13!UBERON:0001013;2.67e-09;14!UBERON:0001894;1.39e-08;7!UBERON:0002360;7.78e-08;2!UBERON:0000094;7.78e-08;2!UBERON:0010743;7.78e-08;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!2.85e-12!2;UBERON:0002757!2.85e-12!2;UBERON:0010134!2.85e-12!2;UBERON:0002784!2.85e-12!2;UBERON:0005408!2.85e-12!2;UBERON:0001899!2.85e-12!2;UBERON:0004733!3.69e-11!12;UBERON:0002028!3.69e-11!12;UBERON:0007277!3.69e-11!12;UBERON:0004732!2.79e-10!13;UBERON:0002680!4.30e-10!9;UBERON:0001895!4.30e-10!9;UBERON:0010092!4.30e-10!9;UBERON:0002037!4.80e-09!6;UBERON:0006215!4.80e-09!6;UBERON:0003076!7.14e-09!15;UBERON:0003057!7.14e-09!15;UBERON:0000310!1.37e-08!10;UBERON:0007023!2.12e-08!115;UBERON:0001443!8.15e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.31e-27;2!UBERON:0002757;1.31e-27;2!UBERON:0010134;1.31e-27;2!UBERON:0005408;1.31e-27;2!UBERON:0001899;1.31e-27;2!UBERON:0002037;9.52e-21;6!UBERON:0003296;2.50e-14;4!UBERON:0010133;2.50e-14;4!UBERON:0002784;2.50e-14;4!UBERON:0002680;4.73e-14;9!UBERON:0001895;4.73e-14;9!UBERON:0004733;1.10e-10;12!UBERON:0002028;1.10e-10;12!UBERON:0004732;6.59e-10;13!UBERON:0001013;2.67e-09;14!UBERON:0001894;1.39e-08;7!UBERON:0002360;7.78e-08;2!UBERON:0000094;7.78e-08;2!UBERON:0010743;7.78e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.40e-27,2;UBERON:0002757,1.40e-27,2;UBERON:0010134,1.40e-27,2;UBERON:0005408,1.40e-27,2;UBERON:0001899,1.40e-27,2;UBERON:0002037,1.02e-20,6;UBERON:0006215,1.02e-20,6;UBERON:0003296,2.58e-14,4;UBERON:0010133,2.58e-14,4;UBERON:0002784,2.58e-14,4;UBERON:0002680,4.95e-14,9;UBERON:0001895,4.95e-14,9;UBERON:0010092,4.95e-14,9;UBERON:0004733,1.13e-10,12;UBERON:0002028,1.13e-10,12;UBERON:0007277,1.13e-10,12;UBERON:0004732,6.80e-10,13;UBERON:0001013,2.60e-09,14;UBERON:0003076,1.20e-08,15;UBERON:0003057,1.20e-08,15;UBERON:0001894,1.42e-08,7;UBERON:0006222,1.42e-08,7;UBERON:0002360,8.60e-08,2;UBERON:0000094,8.60e-08,2;UBERON:0010743,8.60e-08,2 | |||
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|short_description=p1@CLCNKA | |short_description=p1@CLCNKA | ||
}} | }} |
Latest revision as of 08:44, 18 September 2015
Short description: | p1@CLCNKA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLCNKA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010obx.1, uc010oby.1_5end |
EntrezGene: | CLCNKA |
HGNC: | 2026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 7.36e-16 | 8 |
fat cell | 1.76e-14 | 15 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.40e-27 | 2 |
regional part of epithalamus | 1.40e-27 | 2 |
secretory circumventricular organ | 1.40e-27 | 2 |
circumventricular organ | 1.40e-27 | 2 |
epithalamus | 1.40e-27 | 2 |
cerebellum | 1.02e-20 | 6 |
rhombic lip | 1.02e-20 | 6 |
gland of diencephalon | 2.58e-14 | 4 |
neuroendocrine gland | 2.58e-14 | 4 |
regional part of diencephalon | 2.58e-14 | 4 |
regional part of metencephalon | 4.95e-14 | 9 |
metencephalon | 4.95e-14 | 9 |
future metencephalon | 4.95e-14 | 9 |
segmental subdivision of hindbrain | 1.13e-10 | 12 |
hindbrain | 1.13e-10 | 12 |
presumptive hindbrain | 1.13e-10 | 12 |
segmental subdivision of nervous system | 6.80e-10 | 13 |
adipose tissue | 2.60e-09 | 14 |
posterior neural tube | 1.20e-08 | 15 |
chordal neural plate | 1.20e-08 | 15 |
diencephalon | 1.42e-08 | 7 |
future diencephalon | 1.42e-08 | 7 |
meninx | 8.60e-08 | 2 |
membrane organ | 8.60e-08 | 2 |
meningeal cluster | 8.60e-08 | 2 |