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FFCP PHASE1:Hg19::chr2:176972082..176972096,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=3237
|EntrezGene=3237
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=5134
|HGNC=5134
|TSSclassifier=strong
|UniProt=P31277
|UniProt=P31277
|association_with_transcript=0bp_to_NM_021192,uc002uki.2_5end
|association_with_transcript=0bp_to_NM_021192,uc002uki.2_5end
|cluster_id=chr2:176972082..176972096,+
|coexpression_cluster_id=C1885
|description=CAGE_peak_8_at_HOXD11_5end
|description=CAGE_peak_8_at_HOXD11_5end
|id=chr2:176972082..176972096,+
|id=chr2:176972082..176972096,+
|ontology_enrichment_celltype=CL:1000507!6.41e-11!12;CL:1000494!6.41e-11!12;CL:1000497!3.04e-08!18;CL:0002518!3.04e-08!18;CL:1000449!1.06e-07!16;CL:0000066!2.86e-07!254
|ontology_enrichment_celltype=CL:1000507!6.41e-11!12;CL:1000494!6.41e-11!12;CL:1000497!3.04e-08!18;CL:0002518!3.04e-08!18;CL:1000449!1.06e-07!16;CL:0000066!2.86e-07!254
|ontology_enrichment_celltype_v019=CL:0002553;9.89e-08;1!CL:0000511;3.96e-07;1!CL:0002625;3.96e-07;1!CL:0000216;3.96e-07;1
|ontology_enrichment_celltype_v019_2=CL:0002553,9.91e-08,1;CL:0000511,2.84e-07,1;CL:0002625,2.84e-07,1;CL:0000216,2.84e-07,1
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:0050687!1.41e-15!143;DOID:305!1.09e-13!106;DOID:14566!5.54e-11!239;DOID:162!4.04e-10!235;DOID:1749!5.31e-07!14
|ontology_enrichment_disease=DOID:0050687!1.41e-15!143;DOID:305!1.09e-13!106;DOID:14566!5.54e-11!239;DOID:162!4.04e-10!235;DOID:1749!5.31e-07!14
|ontology_enrichment_disease_v019=DOID:0060084;3.47e-09;3!DOID:127;3.47e-09;3!DOID:3151;3.96e-07;1!DOID:3149;3.96e-07;1!DOID:0060072;4.34e-07;4
|ontology_enrichment_disease_v019_2=DOID:0060084,3.34e-09,3;DOID:127,3.34e-09,3;DOID:3151,2.67e-07,1;DOID:3149,2.67e-07,1;DOID:0060072,4.22e-07,4
|ontology_enrichment_uberon=UBERON:0001737!2.01e-15!9;UBERON:0006554!1.68e-11!44;UBERON:0001008!4.02e-11!45;UBERON:0009773!6.41e-11!12;UBERON:0001231!6.41e-11!12;UBERON:0004810!6.41e-11!12;UBERON:0002113!2.29e-10!27;UBERON:0003918!2.29e-10!27;UBERON:0005095!2.29e-10!27;UBERON:0007687!2.29e-10!27;UBERON:0000489!1.33e-09!32;UBERON:0004211!1.06e-07!16;UBERON:0001285!1.06e-07!16;UBERON:0007684!1.06e-07!16;UBERON:0003220!1.06e-07!16;UBERON:0004208!1.06e-07!16;UBERON:0001557!1.32e-07!19;UBERON:0004876!2.46e-07!20;UBERON:0006555!3.86e-07!17;UBERON:0005103!3.86e-07!17;UBERON:0000083!3.86e-07!17;UBERON:0009201!3.86e-07!17;UBERON:0004819!3.86e-07!17;UBERON:0006553!3.86e-07!17;UBERON:0003074!3.86e-07!17;UBERON:0003060!3.86e-07!17
|ontology_enrichment_uberon=UBERON:0001737!2.01e-15!9;UBERON:0006554!1.68e-11!44;UBERON:0001008!4.02e-11!45;UBERON:0009773!6.41e-11!12;UBERON:0001231!6.41e-11!12;UBERON:0004810!6.41e-11!12;UBERON:0002113!2.29e-10!27;UBERON:0003918!2.29e-10!27;UBERON:0005095!2.29e-10!27;UBERON:0007687!2.29e-10!27;UBERON:0000489!1.33e-09!32;UBERON:0004211!1.06e-07!16;UBERON:0001285!1.06e-07!16;UBERON:0007684!1.06e-07!16;UBERON:0003220!1.06e-07!16;UBERON:0004208!1.06e-07!16;UBERON:0001557!1.32e-07!19;UBERON:0004876!2.46e-07!20;UBERON:0006555!3.86e-07!17;UBERON:0005103!3.86e-07!17;UBERON:0000083!3.86e-07!17;UBERON:0009201!3.86e-07!17;UBERON:0004819!3.86e-07!17;UBERON:0006553!3.86e-07!17;UBERON:0003074!3.86e-07!17;UBERON:0003060!3.86e-07!17
|ontology_enrichment_uberon_v019=UBERON:0006834;3.96e-07;1!UBERON:0001136;3.96e-07;1!UBERON:0001343;3.96e-07;1!UBERON:0004910;3.96e-07;1!UBERON:0004813;3.96e-07;1!UBERON:0002346;6.68e-07;4!UBERON:0000923;6.68e-07;4!UBERON:0010316;6.68e-07;4!UBERON:0005291;6.68e-07;4
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.84e-07,1;UBERON:0001343,2.84e-07,1;UBERON:0004910,2.84e-07,1;UBERON:0005154,2.84e-07,1;UBERON:0005295,2.84e-07,1;UBERON:0004813,2.84e-07,1;UBERON:0005297,2.84e-07,1;UBERON:0005294,2.84e-07,1;UBERON:0010141,2.84e-07,1;UBERON:0005891,2.84e-07,1;UBERON:0006834,3.85e-07,1;UBERON:0004871,4.46e-07,8
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|short_description=p8@HOXD11
|short_description=p8@HOXD11
}}
}}

Latest revision as of 08:49, 18 September 2015

Short description:p8@HOXD11
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_8_at_HOXD11_5end
Coexpression cluster:C1885_neuroectodermal_nonsmall_small_neuroblastoma_embryonic_merkel_hairy
Association with transcript: 0bp_to_NM_021192, uc002uki.2_5end
EntrezGene:HOXD11
HGNC: 5134
UniProt: P31277
Genome view:ZENBU


View on UCSC genome browser

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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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