FFCP PHASE1:Hg19::chr17:79826670..79826706,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=396 | |EntrezGene=396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=678 | |HGNC=678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-171bp_to_BC007630_5end | |association_with_transcript=-171bp_to_BC007630_5end | ||
|cluster_id=chr17:79826670..79826706,- | |||
|description=CAGE_peak_4_at_ARHGDIA_5end | |description=CAGE_peak_4_at_ARHGDIA_5end | ||
|id=chr17:79826670..79826706,- | |id=chr17:79826670..79826706,- | ||
|ontology_enrichment_celltype=CL:0002371!1.01e-14!591;CL:0000222!1.26e-13!119;CL:0000144!9.78e-13!625;CL:0000055!1.10e-10!180;CL:0000192!2.65e-10!42;CL:0000514!2.65e-10!42;CL:0000183!3.72e-10!59;CL:0000220!4.59e-10!246;CL:0000723!1.25e-09!436;CL:0002321!1.31e-09!248;CL:0000359!3.05e-09!32;CL:0000680!4.00e-09!57;CL:0000056!4.00e-09!57;CL:0000355!4.00e-09!57;CL:0000048!5.41e-09!430;CL:0000187!1.19e-08!54;CL:0000034!1.31e-08!444;CL:0000393!1.83e-07!60;CL:0000211!1.83e-07!60 | |ontology_enrichment_celltype=CL:0002371!1.01e-14!591;CL:0000222!1.26e-13!119;CL:0000144!9.78e-13!625;CL:0000055!1.10e-10!180;CL:0000192!2.65e-10!42;CL:0000514!2.65e-10!42;CL:0000183!3.72e-10!59;CL:0000220!4.59e-10!246;CL:0000723!1.25e-09!436;CL:0002321!1.31e-09!248;CL:0000359!3.05e-09!32;CL:0000680!4.00e-09!57;CL:0000056!4.00e-09!57;CL:0000355!4.00e-09!57;CL:0000048!5.41e-09!430;CL:0000187!1.19e-08!54;CL:0000034!1.31e-08!444;CL:0000393!1.83e-07!60;CL:0000211!1.83e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.22e-09;32!CL:0000192;4.62e-08;43!CL:0000860;6.33e-07;33!CL:0002057;6.33e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.63e-14,121;CL:0000192,4.55e-10,43;CL:0000514,4.55e-10,43;CL:0002321,6.20e-10,250;CL:0000723,6.38e-10,433;CL:0000359,2.71e-09,32;CL:0000048,2.84e-09,427;CL:0000680,4.67e-09,58;CL:0000056,4.67e-09,58;CL:0000355,4.67e-09,58;CL:0000034,6.62e-09,441;CL:0000187,1.39e-08,55;CL:0000393,1.71e-07,61;CL:0000211,1.71e-07,61;CL:0000115,6.48e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;4.62e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.51e-12!216;UBERON:0004872!1.59e-12!84;UBERON:0000055!2.10e-12!69;UBERON:0001981!2.79e-12!60;UBERON:0007500!2.79e-12!60;UBERON:0004537!2.79e-12!60;UBERON:0006965!2.79e-12!60;UBERON:0001637!5.75e-12!42;UBERON:0003509!5.75e-12!42;UBERON:0004572!5.75e-12!42;UBERON:0002049!1.07e-11!79;UBERON:0007798!1.07e-11!79;UBERON:0000914!2.74e-11!83;UBERON:0002329!2.74e-11!83;UBERON:0003077!2.74e-11!83;UBERON:0003059!2.74e-11!83;UBERON:0007282!2.74e-11!83;UBERON:0009618!2.74e-11!83;UBERON:0007285!2.74e-11!83;UBERON:0004290!5.24e-11!70;UBERON:0000486!5.71e-11!82;UBERON:0000926!2.74e-10!448;UBERON:0004120!2.74e-10!448;UBERON:0006603!2.74e-10!448;UBERON:0005256!3.14e-10!143;UBERON:0003914!1.15e-09!118;UBERON:0004535!5.59e-09!110;UBERON:0001134!7.61e-09!61;UBERON:0002036!7.61e-09!61;UBERON:0003082!7.61e-09!61;UBERON:0002204!8.62e-09!167;UBERON:0002385!9.91e-09!63;UBERON:0001015!9.91e-09!63;UBERON:0000383!9.91e-09!63;UBERON:0004573!5.76e-08!33;UBERON:0004571!5.76e-08!33;UBERON:0001009!6.78e-08!113;UBERON:0000490!5.17e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.10e-08;42!UBERON:0003509;2.10e-08;42!UBERON:0004572;2.10e-08;42!UBERON:0007500;4.18e-08;56!UBERON:0001981;4.18e-08;56!UBERON:0004537;4.18e-08;56!UBERON:0004573;2.19e-07;33!UBERON:0004571;2.19e-07;33!UBERON:0000055;2.80e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.05e-17,315;UBERON:0004120,2.05e-17,315;UBERON:0006603,2.05e-17,315;UBERON:0003081,2.79e-13,203;UBERON:0000055,3.21e-13,68;UBERON:0004872,3.40e-13,83;UBERON:0007500,4.09e-13,59;UBERON:0001981,4.09e-13,59;UBERON:0004537,4.09e-13,59;UBERON:0006965,4.09e-13,59;UBERON:0007503,1.60e-12,78;UBERON:0002049,2.18e-12,78;UBERON:0007798,2.18e-12,78;UBERON:0001637,5.50e-12,42;UBERON:0003509,5.50e-12,42;UBERON:0004572,5.50e-12,42;UBERON:0002329,6.88e-11,71;UBERON:0003059,6.88e-11,71;UBERON:0007282,6.88e-11,71;UBERON:0004290,6.88e-11,71;UBERON:0009618,6.88e-11,71;UBERON:0000486,7.09e-11,83;UBERON:0007524,1.49e-10,73;UBERON:0003077,1.51e-10,72;UBERON:0007285,1.51e-10,72;UBERON:0003914,4.95e-10,117;UBERON:0002204,1.42e-09,167;UBERON:0004535,1.66e-09,109;UBERON:0005256,1.96e-09,122;UBERON:0000490,5.82e-09,148;UBERON:0001134,9.93e-09,62;UBERON:0002036,9.93e-09,62;UBERON:0003082,9.93e-09,62;UBERON:0002385,1.61e-08,64;UBERON:0001015,1.61e-08,64;UBERON:0000383,1.61e-08,64;UBERON:0001009,2.99e-08,112;UBERON:0004573,5.78e-08,33;UBERON:0004571,5.78e-08,33;UBERON:0003104,3.92e-07,160;UBERON:0009142,3.92e-07,160 | |||
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| ||
|short_description=p4@ARHGDIA | |short_description=p4@ARHGDIA | ||
}} | }} |
Latest revision as of 09:01, 18 September 2015
Short description: | p4@ARHGDIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGDIA_5end |
Coexpression cluster: | NA |
Association with transcript: | -171bp_to_BC007630_5end |
EntrezGene: | ARHGDIA |
HGNC: | 678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.63e-14 | 121 |
smooth muscle cell | 4.55e-10 | 43 |
smooth muscle myoblast | 4.55e-10 | 43 |
embryonic cell | 6.20e-10 | 250 |
somatic stem cell | 6.38e-10 | 433 |
vascular associated smooth muscle cell | 2.71e-09 | 32 |
multi fate stem cell | 2.84e-09 | 427 |
muscle precursor cell | 4.67e-09 | 58 |
myoblast | 4.67e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.67e-09 | 58 |
stem cell | 6.62e-09 | 441 |
muscle cell | 1.39e-08 | 55 |
electrically responsive cell | 1.71e-07 | 61 |
electrically active cell | 1.71e-07 | 61 |
endothelial cell | 6.48e-07 | 36 |