FFCP PHASE1:Hg19::chr15:59904021..59904030,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9245 | |EntrezGene=9245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |HGNC=4205 | ||
|TSSclassifier=strong | |||
|UniProt=O95395 | |UniProt=O95395 | ||
|association_with_transcript=38bp_to_ENST00000396065,ENST00000560585_5end | |association_with_transcript=38bp_to_ENST00000396065,ENST00000560585_5end | ||
|cluster_id=chr15:59904021..59904030,+ | |||
|coexpression_cluster_id=C1211 | |||
|description=CAGE_peak_8_at_GCNT3_5end | |description=CAGE_peak_8_at_GCNT3_5end | ||
|id=chr15:59904021..59904030,+ | |id=chr15:59904021..59904030,+ | ||
|ontology_enrichment_celltype=CL:0000569!3.07e-09!4;CL:0000011!3.07e-09!4;CL:1000497!2.75e-07!18;CL:0002518!2.75e-07!18 | |ontology_enrichment_celltype=CL:0000569!3.07e-09!4;CL:0000011!3.07e-09!4;CL:1000497!2.75e-07!18;CL:0002518!2.75e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.10e-08;17!CL:0002518;1.10e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.13e-08,17;CL:0002518,1.13e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.50e-10;1!UBERON:0009497;6.04e-07;13 | |||
|ontology_enrichment_disease=DOID:305!1.78e-09!106;DOID:120!3.14e-09!27;DOID:193!2.08e-08!29;DOID:299!1.66e-07!25;DOID:2394!7.78e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.61e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005172!4.82e-09!55;UBERON:0005173!4.82e-09!55;UBERON:0000160!2.48e-08!27;UBERON:0002113!4.84e-08!27;UBERON:0003918!4.84e-08!27;UBERON:0005095!4.84e-08!27;UBERON:0007687!4.84e-08!27;UBERON:0006554!5.68e-08!44;UBERON:0002417!1.01e-07!61;UBERON:0000916!1.01e-07!61;UBERON:0001008!1.02e-07!45;UBERON:0000059!1.76e-07!11;UBERON:0005409!3.38e-07!35;UBERON:0003134!5.20e-07!37;UBERON:0000474!5.20e-07!37 | |ontology_enrichment_uberon=UBERON:0005172!4.82e-09!55;UBERON:0005173!4.82e-09!55;UBERON:0000160!2.48e-08!27;UBERON:0002113!4.84e-08!27;UBERON:0003918!4.84e-08!27;UBERON:0005095!4.84e-08!27;UBERON:0007687!4.84e-08!27;UBERON:0006554!5.68e-08!44;UBERON:0002417!1.01e-07!61;UBERON:0000916!1.01e-07!61;UBERON:0001008!1.02e-07!45;UBERON:0000059!1.76e-07!11;UBERON:0005409!3.38e-07!35;UBERON:0003134!5.20e-07!37;UBERON:0000474!5.20e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;9.47e-14;22!UBERON:0000160;1.59e-12;17!UBERON:0001155;1.47e-09;9!UBERON:0002108;2.32e-08;4!UBERON:0000059;6.54e-08;11!UBERON:0004921;7.61e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.48e-12,17;UBERON:0005409,3.58e-12,25;UBERON:0001155,1.37e-09,9;UBERON:0002108,2.28e-08,4;UBERON:0000059,6.17e-08,11 | |||
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| ||
|short_description=p8@GCNT3 | |short_description=p8@GCNT3 | ||
}} | }} |
Latest revision as of 09:04, 18 September 2015
Short description: | p8@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GCNT3_5end |
Coexpression cluster: | C1211_small_lung_bile_clear_colon_rectal_tubular |
Association with transcript: | 38bp_to_ENST00000396065, ENST00000560585_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | O95395 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.13e-08 | 17 |
kidney epithelial cell | 1.13e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.48e-12 | 17 |
gastrointestinal system | 3.58e-12 | 25 |
colon | 1.37e-09 | 9 |
small intestine | 2.28e-08 | 4 |
large intestine | 6.17e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.61e-07 | 106 |