FFCP PHASE1:Hg19::chr15:59904021..59904030,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9245 | |EntrezGene=9245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |HGNC=4205 | ||
|TSSclassifier=strong | |||
|UniProt=O95395 | |UniProt=O95395 | ||
|association_with_transcript=38bp_to_ENST00000396065,ENST00000560585_5end | |association_with_transcript=38bp_to_ENST00000396065,ENST00000560585_5end | ||
|cluster_id=chr15:59904021..59904030,+ | |||
|coexpression_cluster_id=C1211 | |coexpression_cluster_id=C1211 | ||
|description=CAGE_peak_8_at_GCNT3_5end | |description=CAGE_peak_8_at_GCNT3_5end | ||
|id=chr15:59904021..59904030,+ | |id=chr15:59904021..59904030,+ | ||
|ontology_enrichment_celltype=CL:0000569!3.07e-09!4;CL:0000011!3.07e-09!4;CL:1000497!2.75e-07!18;CL:0002518!2.75e-07!18 | |ontology_enrichment_celltype=CL:0000569!3.07e-09!4;CL:0000011!3.07e-09!4;CL:1000497!2.75e-07!18;CL:0002518!2.75e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.10e-08;17!CL:0002518;1.10e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.13e-08,17;CL:0002518,1.13e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.50e-10;1!UBERON:0009497;6.04e-07;13 | |||
|ontology_enrichment_disease=DOID:305!1.78e-09!106;DOID:120!3.14e-09!27;DOID:193!2.08e-08!29;DOID:299!1.66e-07!25;DOID:2394!7.78e-07!14 | |ontology_enrichment_disease=DOID:305!1.78e-09!106;DOID:120!3.14e-09!27;DOID:193!2.08e-08!29;DOID:299!1.66e-07!25;DOID:2394!7.78e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.61e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005172!4.82e-09!55;UBERON:0005173!4.82e-09!55;UBERON:0000160!2.48e-08!27;UBERON:0002113!4.84e-08!27;UBERON:0003918!4.84e-08!27;UBERON:0005095!4.84e-08!27;UBERON:0007687!4.84e-08!27;UBERON:0006554!5.68e-08!44;UBERON:0002417!1.01e-07!61;UBERON:0000916!1.01e-07!61;UBERON:0001008!1.02e-07!45;UBERON:0000059!1.76e-07!11;UBERON:0005409!3.38e-07!35;UBERON:0003134!5.20e-07!37;UBERON:0000474!5.20e-07!37 | |ontology_enrichment_uberon=UBERON:0005172!4.82e-09!55;UBERON:0005173!4.82e-09!55;UBERON:0000160!2.48e-08!27;UBERON:0002113!4.84e-08!27;UBERON:0003918!4.84e-08!27;UBERON:0005095!4.84e-08!27;UBERON:0007687!4.84e-08!27;UBERON:0006554!5.68e-08!44;UBERON:0002417!1.01e-07!61;UBERON:0000916!1.01e-07!61;UBERON:0001008!1.02e-07!45;UBERON:0000059!1.76e-07!11;UBERON:0005409!3.38e-07!35;UBERON:0003134!5.20e-07!37;UBERON:0000474!5.20e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;9.47e-14;22!UBERON:0000160;1.59e-12;17!UBERON:0001155;1.47e-09;9!UBERON:0002108;2.32e-08;4!UBERON:0000059;6.54e-08;11!UBERON:0004921;7.61e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.48e-12,17;UBERON:0005409,3.58e-12,25;UBERON:0001155,1.37e-09,9;UBERON:0002108,2.28e-08,4;UBERON:0000059,6.17e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0.131124414959424,0.451199612907412,0.616122696835318,0,0,0.105551628892876,0,0,0,0,1.08378575017541,0,1.01950509218015,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,2.61996756571508,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.552567831062295,0,0,0.861593638227486,0,0,3.04335996948536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85295548414462,0.163232808159148,0.282706142867882,0,2.98578579323551,1.06149077404007,1.83309043480088,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.0801588202515337,2.77488893161158,0,1.87317542300338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86661500537946,0.659326867049332,0.808842526250219,2.46068703786872,0,0,0,0.160753148465019,0,0,0,0,0,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,6.33021300172019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,2.74608082076308,0.302461847526478,0.15543720058278,0.147855149989634,0,0.899606224327209,0.155262956876259,0.829412415681711,0.265841714557995,0,0.150257608997218,0,0,0,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0,0.078493092850514,0,0.840816489941367,0,3.45484145949794,1.9110067515482,0,0,0,0,0,0,0,0,0,0.354996002191696,0.426067023795788,0,0,0.62041277132864,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,3.47283711485751,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0.0802413666891683,0,0,0,0,0,0,2.645134202577,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.932388670104793,0,0,0,0,4.7607357116491,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0.131124414959424,0.451199612907412,0.616122696835318,0,0,0.105551628892876,0,0,0,0,1.08378575017541,0,1.01950509218015,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,2.61996756571508,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.552567831062295,0,0,0.861593638227486,0,0,3.04335996948536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85295548414462,0.163232808159148,0.282706142867882,0,2.98578579323551,1.06149077404007,1.83309043480088,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.0801588202515337,2.77488893161158,0,1.87317542300338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86661500537946,0.659326867049332,0.808842526250219,2.46068703786872,0,0,0,0.160753148465019,0,0,0,0,0,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,6.33021300172019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,2.74608082076308,0.302461847526478,0.15543720058278,0.147855149989634,0,0.899606224327209,0.155262956876259,0.829412415681711,0.265841714557995,0,0.150257608997218,0,0,0,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0,0.078493092850514,0,0.840816489941367,0,3.45484145949794,1.9110067515482,0,0,0,0,0,0,0,0,0,0.354996002191696,0.426067023795788,0,0,0.62041277132864,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,3.47283711485751,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0.0802413666891683,0,0,0,0,0,0,2.645134202577,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.932388670104793,0,0,0,0,4.7607357116491,0,0.122241444182866,0,0,0,0 | ||
|short_description=p8@GCNT3 | |short_description=p8@GCNT3 | ||
}} | }} |
Latest revision as of 09:04, 18 September 2015
Short description: | p8@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GCNT3_5end |
Coexpression cluster: | C1211_small_lung_bile_clear_colon_rectal_tubular |
Association with transcript: | 38bp_to_ENST00000396065, ENST00000560585_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | O95395 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.13e-08 | 17 |
kidney epithelial cell | 1.13e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.48e-12 | 17 |
gastrointestinal system | 3.58e-12 | 25 |
colon | 1.37e-09 | 9 |
small intestine | 2.28e-08 | 4 |
large intestine | 6.17e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.61e-07 | 106 |