FFCP PHASE1:Hg19::chr15:59904110..59904119,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9245 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |||
|TSSclassifier=strong | |||
|UniProt=O95395 | |||
|association_with_transcript=127bp_to_ENST00000396065,ENST00000560585_5end | |||
|cluster_id=chr15:59904110..59904119,+ | |||
|coexpression_cluster_id=C1211 | |||
|description=CAGE_peak_11_at_GCNT3_5end | |||
|id=chr15:59904110..59904119,+ | |||
|ontology_enrichment_celltype=CL:1000497!3.41e-09!18;CL:0002518!3.41e-09!18;CL:1000507!2.04e-07!12;CL:1000494!2.04e-07!12 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.72e-18;1 | |||
|ontology_enrichment_disease=DOID:299!5.72e-13!25;DOID:305!2.14e-11!106;DOID:4468!8.18e-09!2;DOID:4929!1.61e-08!2;DOID:0050687!5.58e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:4468;8.32e-10;2!DOID:4929;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,8.69e-10,2;DOID:4929,1.57e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.47e-14!35;UBERON:0000160!4.51e-14!27;UBERON:0000059!8.01e-12!11;UBERON:0004921!1.72e-11!129;UBERON:0004185!1.72e-11!129;UBERON:0005172!1.82e-11!55;UBERON:0005173!1.82e-11!55;UBERON:0001155!2.29e-10!9;UBERON:0002417!5.27e-10!61;UBERON:0000916!5.27e-10!61;UBERON:0001007!1.40e-09!155;UBERON:0001555!1.40e-09!155;UBERON:0007026!1.40e-09!155;UBERON:0002113!1.79e-09!27;UBERON:0003918!1.79e-09!27;UBERON:0005095!1.79e-09!27;UBERON:0007687!1.79e-09!27;UBERON:0006554!1.97e-09!44;UBERON:0001008!3.63e-09!45;UBERON:0004119!3.97e-09!169;UBERON:0000925!3.97e-09!169;UBERON:0006595!3.97e-09!169;UBERON:0005177!7.68e-08!107;UBERON:0000489!9.73e-08!32;UBERON:0009773!2.04e-07!12;UBERON:0001231!2.04e-07!12;UBERON:0004810!2.04e-07!12;UBERON:0000077!3.17e-07!130;UBERON:0003929!3.32e-07!54;UBERON:0004907!5.09e-07!5;UBERON:0009854!6.53e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0001155;5.64e-17;9!UBERON:0000160;5.49e-15;17!UBERON:0000059;5.17e-14;11!UBERON:0005409;8.35e-12;22!UBERON:0002294;1.64e-10;7!UBERON:0001173;1.64e-10;7!UBERON:0003127;1.64e-09;2!UBERON:0004921;4.85e-08;33!UBERON:0002110;7.49e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,5.49e-17,9;UBERON:0000160,5.29e-15,17;UBERON:0000059,5.05e-14,11;UBERON:0005409,1.73e-10,25;UBERON:0003127,1.44e-09,2;UBERON:0002294,2.20e-08,9;UBERON:0001173,2.20e-08,9;UBERON:0004912,2.20e-08,9;UBERON:0002110,7.28e-07,3;UBERON:0006242,7.28e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.828728900423067,0,0,0,0,0.770153371044148,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0.764628819135115,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.246169610922139,0,0,4.83357171624145,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,7.59593032300897,0.652931232636591,0.141353071433941,0,1.99052386215701,1.32686346755009,1.22206028986725,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,1.13843818411917,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,2.56143593687223,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.164831716762333,0.471824806979294,0.984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0.788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30369197441421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.709163045303809,0,0,0,0.560544326627578,0,0.863710364874486,0.9555033757741,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0.62041277132864,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,7.87176412701035,0.874238242015829,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64961072403156,0,0,0,0,1.43720323370539,0,0,0,0,0,0 | |||
|short_description=p11@GCNT3 | |||
}} |
Latest revision as of 09:08, 18 September 2015
Short description: | p11@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GCNT3_5end |
Coexpression cluster: | C1211_small_lung_bile_clear_colon_rectal_tubular |
Association with transcript: | 127bp_to_ENST00000396065, ENST00000560585_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | O95395 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
colon | 5.49e-17 | 9 |
intestine | 5.29e-15 | 17 |
large intestine | 5.05e-14 | 11 |
gastrointestinal system | 1.73e-10 | 25 |
open tracheal system trachea | 1.44e-09 | 2 |
biliary system | 2.20e-08 | 9 |
biliary tree | 2.20e-08 | 9 |
biliary bud | 2.20e-08 | 9 |
gallbladder | 7.28e-07 | 3 |
gall bladder primordium | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 8.69e-10 | 2 |
tubular adenocarcinoma | 1.57e-09 | 2 |