FFCP PHASE1:Hg19::chr2:73340013..73340113,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26056 | |EntrezGene=26056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24845 | |HGNC=24845 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXF6,Q9UFM0 | |UniProt=Q9BXF6,Q9UFM0 | ||
|association_with_transcript=32bp_to_ENST00000258098,NM_015470,uc002siu.3_5end | |association_with_transcript=32bp_to_ENST00000258098,NM_015470,uc002siu.3_5end | ||
|cluster_id=chr2:73340013..73340113,- | |||
|description=CAGE_peak_1_at_RAB11FIP5_5end | |description=CAGE_peak_1_at_RAB11FIP5_5end | ||
|id=chr2:73340013..73340113,- | |id=chr2:73340013..73340113,- | ||
|ontology_enrichment_celltype=CL:0000055!1.53e-17!180;CL:0000222!5.53e-16!119;CL:0000220!3.81e-14!246;CL:0002321!1.24e-13!248;CL:0000057!1.22e-11!75;CL:0000192!9.84e-10!42;CL:0000514!9.84e-10!42;CL:0000359!1.30e-09!32;CL:0000183!3.61e-09!59;CL:0000680!2.41e-08!57;CL:0000056!2.41e-08!57;CL:0000355!2.41e-08!57;CL:0000187!5.82e-08!54;CL:0000213!3.68e-07!57;CL:0000215!3.68e-07!57;CL:0002078!3.71e-07!44 | |ontology_enrichment_celltype=CL:0000055!1.53e-17!180;CL:0000222!5.53e-16!119;CL:0000220!3.81e-14!246;CL:0002321!1.24e-13!248;CL:0000057!1.22e-11!75;CL:0000192!9.84e-10!42;CL:0000514!9.84e-10!42;CL:0000359!1.30e-09!32;CL:0000183!3.61e-09!59;CL:0000680!2.41e-08!57;CL:0000056!2.41e-08!57;CL:0000355!2.41e-08!57;CL:0000187!5.82e-08!54;CL:0000213!3.68e-07!57;CL:0000215!3.68e-07!57;CL:0002078!3.71e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.37e-09;32!CL:0000192;1.12e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.15e-16,121;CL:0002321,4.99e-14,250;CL:0000057,5.97e-12,76;CL:0000192,7.07e-10,43;CL:0000514,7.07e-10,43;CL:0000359,1.23e-09,32;CL:0000680,1.71e-08,58;CL:0000056,1.71e-08,58;CL:0000355,1.71e-08,58;CL:0000187,4.14e-08,55;CL:0002078,2.26e-07,45;CL:0000213,2.28e-07,58;CL:0000215,2.28e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.12e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.11e-23!365;UBERON:0000483!2.86e-19!309;UBERON:0000119!8.00e-19!312;UBERON:0004111!2.87e-18!241;UBERON:0004872!1.50e-17!84;UBERON:0000025!1.23e-15!194;UBERON:0000477!1.36e-15!286;UBERON:0001981!3.86e-15!60;UBERON:0007500!3.86e-15!60;UBERON:0004537!3.86e-15!60;UBERON:0006965!3.86e-15!60;UBERON:0003914!5.30e-15!118;UBERON:0000055!7.61e-15!69;UBERON:0002049!9.51e-14!79;UBERON:0007798!9.51e-14!79;UBERON:0001637!4.72e-13!42;UBERON:0003509!4.72e-13!42;UBERON:0004572!4.72e-13!42;UBERON:0000481!9.21e-13!347;UBERON:0002100!1.16e-12!216;UBERON:0000468!9.95e-12!659;UBERON:0005256!3.33e-11!143;UBERON:0000486!4.85e-11!82;UBERON:0000467!6.46e-11!625;UBERON:0000480!1.04e-10!626;UBERON:0000914!2.92e-10!83;UBERON:0002329!2.92e-10!83;UBERON:0003077!2.92e-10!83;UBERON:0003059!2.92e-10!83;UBERON:0007282!2.92e-10!83;UBERON:0009618!2.92e-10!83;UBERON:0007285!2.92e-10!83;UBERON:0000064!3.17e-10!219;UBERON:0004573!5.68e-10!33;UBERON:0004571!5.68e-10!33;UBERON:0003102!6.10e-10!95;UBERON:0004290!4.95e-09!70;UBERON:0001009!1.64e-08!113;UBERON:0003103!3.88e-08!69;UBERON:0004535!4.16e-08!110;UBERON:0001134!5.47e-08!61;UBERON:0002036!5.47e-08!61;UBERON:0003082!5.47e-08!61;UBERON:0000490!7.75e-08!138;UBERON:0003104!1.09e-07!238;UBERON:0009142!1.09e-07!238;UBERON:0002385!1.58e-07!63;UBERON:0001015!1.58e-07!63;UBERON:0000383!1.58e-07!63;UBERON:0002199!3.04e-07!45;UBERON:0002416!3.04e-07!45;UBERON:0002050!8.28e-07!605;UBERON:0005423!8.28e-07!605;UBERON:0000923!8.66e-07!604;UBERON:0005291!8.66e-07!604;UBERON:0006598!8.66e-07!604;UBERON:0002532!8.66e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.52e-09;42!UBERON:0003509;1.52e-09;42!UBERON:0004572;1.52e-09;42!UBERON:0007500;4.08e-09;56!UBERON:0001981;4.08e-09;56!UBERON:0004537;4.08e-09;56!UBERON:0004573;5.66e-09;33!UBERON:0004571;5.66e-09;33!UBERON:0003914;1.16e-08;74!UBERON:0000055;9.68e-08;65 | |||
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| ||
|short_description=p1@RAB11FIP5 | |short_description=p1@RAB11FIP5 | ||
}} | }} |
Latest revision as of 09:10, 18 September 2015
Short description: | p1@RAB11FIP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB11FIP5_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000258098, NM_015470, uc002siu.3_5end |
EntrezGene: | RAB11FIP5 |
HGNC: | 24845 |
UniProt: | Q9BXF6Q9UFM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.15e-16 | 121 |
embryonic cell | 4.99e-14 | 250 |
fibroblast | 5.97e-12 | 76 |
smooth muscle cell | 7.07e-10 | 43 |
smooth muscle myoblast | 7.07e-10 | 43 |
vascular associated smooth muscle cell | 1.23e-09 | 32 |
muscle precursor cell | 1.71e-08 | 58 |
myoblast | 1.71e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.71e-08 | 58 |
muscle cell | 4.14e-08 | 55 |
meso-epithelial cell | 2.26e-07 | 45 |
lining cell | 2.28e-07 | 58 |
barrier cell | 2.28e-07 | 58 |