FFCP PHASE1:Hg19::chr15:59908955..59908965,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9245 | |EntrezGene=9245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |HGNC=4205 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=225bp_to_ENST00000560210_5end | |association_with_transcript=225bp_to_ENST00000560210_5end | ||
|cluster_id=chr15:59908955..59908965,+ | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_16_at_GCNT3_5end | |description=CAGE_peak_16_at_GCNT3_5end | ||
|id=chr15:59908955..59908965,+ | |id=chr15:59908955..59908965,+ | ||
|ontology_enrichment_celltype=CL:0002149!2.83e-07!6;CL:0002255!2.83e-07!6;CL:0000239!6.94e-07!3;CL:1000615!6.94e-07!3;CL:0002306!6.94e-07!3 | |ontology_enrichment_celltype=CL:0002149!2.83e-07!6;CL:0002255!2.83e-07!6;CL:0000239!6.94e-07!3;CL:1000615!6.94e-07!3;CL:0002306!6.94e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.07e-23;1!CL:0000164;1.07e-23;1!CL:0000502;1.07e-23;1!CL:0000172;1.07e-23;1!CL:0000173;1.07e-23;1!CL:0002553;4.59e-23;1!CL:0000083;9.36e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.07e-23,1;CL:0000164,1.07e-23,1;CL:0000502,1.07e-23,1;CL:0000172,1.07e-23,1;CL:0000173,1.07e-23,1;CL:0002351,1.07e-23,1;CL:0002553,3.28e-23,1;CL:0000083,9.63e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002351;1.07e-23;1 | |||
|ontology_enrichment_disease=DOID:3001!2.83e-07!6 | |ontology_enrichment_disease=DOID:3001!2.83e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:4430;1.07e-23;1!DOID:4074;3.06e-12;2!DOID:4905;3.06e-12;2!DOID:3498;3.06e-12;2!DOID:1793;9.36e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.07e-23,1;DOID:4074,3.24e-12,2;DOID:4905,3.24e-12,2;DOID:3498,3.24e-12,2;DOID:1793,9.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.40e-12!129;UBERON:0004185!3.40e-12!129;UBERON:0003127!2.53e-10!2;UBERON:0004119!5.59e-10!169;UBERON:0000925!5.59e-10!169;UBERON:0006595!5.59e-10!169;UBERON:0001829!9.21e-10!2;UBERON:0001007!2.72e-09!155;UBERON:0001555!2.72e-09!155;UBERON:0007026!2.72e-09!155;UBERON:0000078!1.93e-08!18;UBERON:0000077!1.12e-07!130;UBERON:0001044!2.83e-07!6;UBERON:0003293!2.83e-07!6;UBERON:0003294!2.83e-07!6;UBERON:0010047!2.83e-07!6;UBERON:0000167!2.83e-07!6;UBERON:0000166!3.88e-07!21;UBERON:0000464!4.67e-07!104;UBERON:0001723!5.83e-07!3;UBERON:0001033!5.83e-07!3;UBERON:0010056!5.83e-07!3;UBERON:0000466!6.10e-07!126;UBERON:0006853!6.94e-07!3;UBERON:0007685!6.94e-07!3;UBERON:0004134!6.94e-07!3;UBERON:0000161!7.62e-07!35;UBERON:0001041!9.36e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.32e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.32e-12,2 | |||
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| ||
|short_description=p16@GCNT3 | |short_description=p16@GCNT3 | ||
}} | }} |
Latest revision as of 09:16, 18 September 2015
Short description: | p16@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_GCNT3_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | 225bp_to_ENST00000560210_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.07e-23 | 1 |
enteroendocrine cell | 1.07e-23 | 1 |
type D enteroendocrine cell | 1.07e-23 | 1 |
somatostatin secreting cell | 1.07e-23 | 1 |
pancreatic D cell | 1.07e-23 | 1 |
progenitor cell of endocrine pancreas | 1.07e-23 | 1 |
lung fibroblast | 3.28e-23 | 1 |
epithelial cell of pancreas | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.32e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.07e-23 | 1 |
pancreas adenocarcinoma | 3.24e-12 | 2 |
pancreatic carcinoma | 3.24e-12 | 2 |
pancreatic ductal adenocarcinoma | 3.24e-12 | 2 |
pancreatic cancer | 9.63e-07 | 4 |