FFCP PHASE1:Hg19::chr15:59909013..59909022,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9245 | |EntrezGene=9245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |HGNC=4205 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=283bp_to_ENST00000560210_5end | |association_with_transcript=283bp_to_ENST00000560210_5end | ||
|cluster_id=chr15:59909013..59909022,+ | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_19_at_GCNT3_5end | |description=CAGE_peak_19_at_GCNT3_5end | ||
|id=chr15:59909013..59909022,+ | |id=chr15:59909013..59909022,+ | ||
|ontology_enrichment_celltype=CL:0000167!6.59e-08!1;CL:0000164!6.59e-08!1;CL:0000502!6.59e-08!1;CL:0000172!6.59e-08!1;CL:0000173!6.59e-08!1;CL:0002351!6.59e-08!1;CL:0000083!8.69e-07!4 | |ontology_enrichment_celltype=CL:0000167!6.59e-08!1;CL:0000164!6.59e-08!1;CL:0000502!6.59e-08!1;CL:0000172!6.59e-08!1;CL:0000173!6.59e-08!1;CL:0002351!6.59e-08!1;CL:0000083!8.69e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.84e-34;1!CL:0000164;1.84e-34;1!CL:0000502;1.84e-34;1!CL:0000172;1.84e-34;1!CL:0000173;1.84e-34;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.84e-34,1;CL:0000164,1.84e-34,1;CL:0000502,1.84e-34,1;CL:0000172,1.84e-34,1;CL:0000173,1.84e-34,1;CL:0002351,1.84e-34,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.84e-34;1!UBERON:0008801;5.97e-34;1 | |||
|ontology_enrichment_disease=DOID:4430!6.59e-08!1;DOID:1793!8.69e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.84e-34;1!DOID:169;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.84e-34,1;DOID:169,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003127!7.57e-14!2;UBERON:0001829!9.14e-14!2;UBERON:0000078!3.75e-12!18;UBERON:0000166!2.48e-10!21;UBERON:0001044!4.61e-10!6;UBERON:0003293!4.61e-10!6;UBERON:0003294!4.61e-10!6;UBERON:0010047!4.61e-10!6;UBERON:0000167!4.61e-10!6;UBERON:0001723!2.06e-09!3;UBERON:0001033!2.06e-09!3;UBERON:0010056!2.06e-09!3;UBERON:0001041!4.29e-08!98;UBERON:0001831!8.54e-08!1;UBERON:0001567!8.54e-08!1;UBERON:0008801!8.54e-08!1;UBERON:0002372!9.71e-08!1;UBERON:0001961!9.71e-08!1;UBERON:0001744!9.71e-08!1;UBERON:0001735!9.71e-08!1;UBERON:0001736!1.18e-07!1;UBERON:0006298!1.18e-07!1;UBERON:0000165!1.34e-07!28;UBERON:0000930!1.34e-07!28;UBERON:0001004!6.20e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;5.97e-34;1!UBERON:0001567;5.97e-34;1!UBERON:0003127;7.05e-18;2!UBERON:0001829;9.87e-18;2!UBERON:0004089;9.87e-18;2!UBERON:0001723;3.24e-12;3!UBERON:0001033;3.24e-12;3!UBERON:0001044;8.73e-07;6!UBERON:0003293;8.73e-07;6!UBERON:0003294;8.73e-07;6!UBERON:0010047;8.73e-07;6!UBERON:0003408;8.73e-07;6!UBERON:0000167;8.73e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,7.06e-34,1;UBERON:0001567,7.06e-34,1;UBERON:0008801,7.06e-34,1;UBERON:0003127,7.67e-18,2;UBERON:0001829,1.07e-17,2;UBERON:0004089,1.07e-17,2;UBERON:0001723,3.24e-12,3;UBERON:0001033,3.24e-12,3;UBERON:0010056,3.24e-12,3;UBERON:0000166,6.09e-07,22;UBERON:0001044,8.97e-07,6;UBERON:0003293,8.97e-07,6;UBERON:0003294,8.97e-07,6;UBERON:0010047,8.97e-07,6;UBERON:0000167,8.97e-07,6 | |||
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|short_description=p19@GCNT3 | |short_description=p19@GCNT3 | ||
}} | }} |
Latest revision as of 09:17, 18 September 2015
Short description: | p19@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_GCNT3_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | 283bp_to_ENST00000560210_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.84e-34 | 1 |
enteroendocrine cell | 1.84e-34 | 1 |
type D enteroendocrine cell | 1.84e-34 | 1 |
somatostatin secreting cell | 1.84e-34 | 1 |
pancreatic D cell | 1.84e-34 | 1 |
progenitor cell of endocrine pancreas | 1.84e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 7.06e-34 | 1 |
cheek | 7.06e-34 | 1 |
parotid gland primordium | 7.06e-34 | 1 |
open tracheal system trachea | 7.67e-18 | 2 |
major salivary gland | 1.07e-17 | 2 |
midface | 1.07e-17 | 2 |
tongue | 3.24e-12 | 3 |
gustatory system | 3.24e-12 | 3 |
future tongue | 3.24e-12 | 3 |
oral opening | 6.09e-07 | 22 |
saliva-secreting gland | 8.97e-07 | 6 |
gland of oral region | 8.97e-07 | 6 |
gland of foregut | 8.97e-07 | 6 |
oral gland | 8.97e-07 | 6 |
oral cavity | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.84e-34 | 1 |
neuroendocrine tumor | 7.17e-07 | 6 |