FFCP PHASE1:Hg19::chr2:177001336..177001357,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3232 | |EntrezGene=3232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5137 | |HGNC=5137 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000459979,uc002ukr.2_5end | |association_with_transcript=0bp_to_ENST00000459979,uc002ukr.2_5end | ||
|cluster_id=chr2:177001336..177001357,+ | |||
|description=CAGE_peak_2_at_HOXD3_5end | |description=CAGE_peak_2_at_HOXD3_5end | ||
|id=chr2:177001336..177001357,+ | |id=chr2:177001336..177001357,+ | ||
|ontology_enrichment_celltype=CL:0002620!8.67e-08!23;CL:0002139!9.44e-08!24 | |ontology_enrichment_celltype=CL:0002620!8.67e-08!23;CL:0002139!9.44e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0002138;4.25e-09;6!CL:0002139;1.10e-08;24!CL:0002618;7.24e-07;3 | |ontology_enrichment_celltype_v019=CL:0002138;4.25e-09;6!CL:0002139;1.10e-08;24!CL:0002618;7.24e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,4.14e-09,6;CL:0002138,4.14e-09,6;CL:0005022,4.14e-09,6;CL:0002139,6.51e-09,24;CL:0002618,3.99e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;4.25e-09;6 | |ontology_enrichment_development_v019=CL:0005022;4.25e-09;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;5.12e-08;10 | |ontology_enrichment_disease_v019=DOID:171;5.12e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,4.45e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001473!5.44e-08!8;UBERON:0004536!5.44e-08!8;UBERON:0006558!5.44e-08!8;UBERON:0000489!2.92e-07!32;UBERON:0002465!5.94e-07!10 | |ontology_enrichment_uberon=UBERON:0001473!5.44e-08!8;UBERON:0004536!5.44e-08!8;UBERON:0006558!5.44e-08!8;UBERON:0000489!2.92e-07!32;UBERON:0002465!5.94e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;4.45e-13;8!UBERON:0004536;4.45e-13;8!UBERON:0006558;4.45e-13;8!UBERON:0002465;3.13e-10;10!UBERON:0002050;2.71e-08;5!UBERON:0005423;2.71e-08;5!UBERON:0006947;1.08e-07;3!UBERON:0004054;1.08e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001473;4.45e-13;8!UBERON:0004536;4.45e-13;8!UBERON:0006558;4.45e-13;8!UBERON:0002465;3.13e-10;10!UBERON:0002050;2.71e-08;5!UBERON:0005423;2.71e-08;5!UBERON:0006947;1.08e-07;3!UBERON:0004054;1.08e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,4.19e-13,8;UBERON:0004536,4.19e-13,8;UBERON:0006558,4.19e-13,8;UBERON:0002465,2.99e-10,10;UBERON:0006947,1.31e-07,3;UBERON:0004054,1.31e-07,3 | |||
|phase1_expression=0.908391896352783,1.92690471501885,0,1.0007329835313,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.144846518960824,0,0.973269740605272,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,1.8089173141853,2.13459757612026,2.34304428935269,0.805658634218294,1.52054421143703,3.90499292077071,0.367663080345869,0,1.60739510911344,1.79623498100936,1.23872628531654,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.352303495931295,0.485618833104395,0.421352420106746,0,0,0,0,0,2.73048408581408,2.15585442544872,0,0,0,0,0,0,0,4.84352016359927,1.92201649936711,0.847727604638247,2.10063767259082,0.309157587715317,3.09168648054755,0.37223371266318,1.5189869901714,1.26668106709558,1.26216887122057,0.368199594569197,0,2.84007674013291,1.10827308050404,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44366447761074,0.462985512576611,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,1.17217447210047,1.71072446022705,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0,0.258543431515556,3.57656445851882,0,0.531876233169741,3.12022310734098,0.257207374262142,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0,0,1.20378439891088,0,0,0,1.10621501125022,0,0,0,0,0,0,0,0,0.30239029332968,0.992431231275107,2.60885354589706,1.40330047216537,0,2.55853624533352,0,1.48418066444991,0,0.532685175939381,0.164254312027618,0,0.348631135379878,0.120859449591622,0,0,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.850468526382578,0.431831832204279,3.08454505380579,0,1.00337954770971,0,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.247528499761764,0,0,0,0.290012154876366,0.770243085573222,0.460511024178389,0.275673144969061,0.751941714077915,0.725083469571143,0.852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0.54907405947211,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,2.53329162357197,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0.284136146806413,0,0.593929361665277,0,0,0,0,0,0,0.796991953004279,1.93398740871803,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,3.62499787717397,0,0,1.18193840883968,0,1.45802306691627,4.86149985813218,0,0,0,0,0,0,0,0.139423744278603,2.00070672109872,0,0,0,0.434589487688032,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,1.73110911793673,0.995261931078505,0.530745387020035,6.11030144933625,0,0,0,0,1.60515529459758,0,0,0,0,1.18375320854817,2.41981432097328,0,0.31593289814244,0.450970258243478,0.518440956986236,0,0,0,0,1.42304773014896,0.277349346026277,0,0.0979923974143777,0,3.31980669659857,1.37588825977293,0,0,0,0.387956065953678,2.20640316728751,0.677942222341597,0,0,0,0,0,0.640358984218058,0,0.72045208577053,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.201550417460179,0,1.16495949527454,0,0,0,0.78741985211799,0,0,0,0,0,0,0,0,0,0,0.788057072991982,4.82582210841983,0,0,0.191915197319445,0,0,0,0.542999601753713,0.864221491201268,0.979762080328227,0,0,0.851940108927109,0.226624183040251,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,1.08803560673895,1.5041393641362,0.612691153526923,0.983617892129413,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,1.40500471742064,0.724605143054126,0.74627401443437,0.467426619694449,0.554805861502613,0,0.251567901752575,0.889811221596536,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,1.04349012362347,0,0,0,0.181848659202559,0.107410557042488,0,1.19428766609585,0,2.06037423109676,2.69399591012735,0,0,0,0,0.453411851024545,0.231522474323834,0,0,0.308801447160972,0.219284049578707,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.552317850755522,0,0,1.15104934173287,1.61737217095023,4.4034463719651,0.218419276384028,1.52759276958623,15.3053942473212,5.8249809201731,0,0.318004350653419,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994581110581374,1.35378591028663,0.20170506870352,0,0,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0.863424021355654,0,0,3.65263488203798,0.215927591218621,0,0,0,0,3.12944890144643,0,0,0,0,0,0.354996002191696,0.170426809518315,2.54032230114557,0,0,0,0,0,0,0,0.1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| ||
|short_description=p2@HOXD3 | |short_description=p2@HOXD3 | ||
}} | }} |
Latest revision as of 09:21, 18 September 2015
Short description: | p2@HOXD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000459979, uc002ukr.2_5end |
EntrezGene: | HOXD3 |
HGNC: | 5137 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 4.14e-09 | 6 |
endothelial cell of lymphatic vessel | 4.14e-09 | 6 |
vascular lymphangioblast | 4.14e-09 | 6 |
endothelial cell of vascular tree | 6.51e-09 | 24 |
endothelial cell of umbilical vein | 3.99e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 4.19e-13 | 8 |
lymph vasculature | 4.19e-13 | 8 |
lymphatic part of lymphoid system | 4.19e-13 | 8 |
lymphoid system | 2.99e-10 | 10 |
male genital duct | 1.31e-07 | 3 |
internal male genitalia | 1.31e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.45e-08 | 10 |