FFCP PHASE1:Hg19::chr12:46123273..46123329,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=196528 | |EntrezGene=196528 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18037 | |HGNC=18037 | ||
|TSSclassifier=strong | |||
|UniProt=Q68CP9 | |UniProt=Q68CP9 | ||
|association_with_transcript=-118bp_to_ENST00000334344_5end | |association_with_transcript=-118bp_to_ENST00000334344_5end | ||
|cluster_id=chr12:46123273..46123329,+ | |||
|coexpression_cluster_id=C443 | |coexpression_cluster_id=C443 | ||
|description=CAGE_peak_3_at_ARID2_5end | |description=CAGE_peak_3_at_ARID2_5end | ||
|id=chr12:46123273..46123329,+ | |id=chr12:46123273..46123329,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.10e-12!172;CL:0000566!1.10e-12!172;CL:0000738!1.61e-12!140;CL:0002032!4.55e-11!165;CL:0000837!4.55e-11!165;CL:0000988!8.11e-11!182;CL:0000791!1.33e-10!18;CL:0000789!1.33e-10!18;CL:0002420!1.33e-10!18;CL:0002419!1.33e-10!18;CL:0000790!1.33e-10!18;CL:0002031!2.67e-09!124;CL:0002087!1.17e-08!119;CL:0000625!3.18e-07!11;CL:0000838!5.39e-07!52;CL:0000542!6.19e-07!53;CL:0000051!6.19e-07!53;CL:0000084!6.57e-07!25;CL:0000827!6.57e-07!25 | |ontology_enrichment_celltype=CL:0000037!1.10e-12!172;CL:0000566!1.10e-12!172;CL:0000738!1.61e-12!140;CL:0002032!4.55e-11!165;CL:0000837!4.55e-11!165;CL:0000988!8.11e-11!182;CL:0000791!1.33e-10!18;CL:0000789!1.33e-10!18;CL:0002420!1.33e-10!18;CL:0002419!1.33e-10!18;CL:0000790!1.33e-10!18;CL:0002031!2.67e-09!124;CL:0002087!1.17e-08!119;CL:0000625!3.18e-07!11;CL:0000838!5.39e-07!52;CL:0000542!6.19e-07!53;CL:0000051!6.19e-07!53;CL:0000084!6.57e-07!25;CL:0000827!6.57e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.50e-13;18!CL:0000789;1.50e-13;18!CL:0002419;1.50e-13;18!CL:0000084;3.53e-10;25!CL:0000625;4.18e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.67e-13,18;CL:0000789,1.67e-13,18;CL:0002420,1.67e-13,18;CL:0002419,1.67e-13,18;CL:0000790,1.67e-13,18;CL:0000037,2.39e-11,168;CL:0000738,3.46e-11,136;CL:0000084,5.25e-10,25;CL:0000827,5.25e-10,25;CL:0002032,8.58e-10,161;CL:0000837,8.58e-10,161;CL:0000988,9.09e-10,177;CL:0000625,4.78e-09,11;CL:0000838,6.73e-09,52;CL:0000542,1.64e-08,53;CL:0000051,1.64e-08,53;CL:0002031,6.26e-08,120;CL:0002087,1.19e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;1.50e-13;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.81e-24!115;UBERON:0001049!1.87e-08!57;UBERON:0005068!1.87e-08!57;UBERON:0006241!1.87e-08!57;UBERON:0007135!1.87e-08!57 | |ontology_enrichment_uberon=UBERON:0007023!3.81e-24!115;UBERON:0001049!1.87e-08!57;UBERON:0005068!1.87e-08!57;UBERON:0006241!1.87e-08!57;UBERON:0007135!1.87e-08!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.38e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.22e-24,114;UBERON:0001049,1.59e-08,56;UBERON:0005068,1.59e-08,56;UBERON:0006241,1.59e-08,56;UBERON:0007135,1.59e-08,56;UBERON:0000073,2.10e-07,53;UBERON:0002616,2.10e-07,53 | |||
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| ||
|short_description=p3@ARID2 | |short_description=p3@ARID2 | ||
}} | }} |
Latest revision as of 10:10, 18 September 2015
Short description: | p3@ARID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARID2_5end |
Coexpression cluster: | C443_CD4_CD8_Natural_Eosinophils_Neutrophils_Peripheral_blood |
Association with transcript: | -118bp_to_ENST00000334344_5end |
EntrezGene: | ARID2 |
HGNC: | 18037 |
UniProt: | Q68CP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.67e-13 | 18 |
alpha-beta T cell | 1.67e-13 | 18 |
immature T cell | 1.67e-13 | 18 |
mature T cell | 1.67e-13 | 18 |
immature alpha-beta T cell | 1.67e-13 | 18 |
hematopoietic stem cell | 2.39e-11 | 168 |
leukocyte | 3.46e-11 | 136 |
T cell | 5.25e-10 | 25 |
pro-T cell | 5.25e-10 | 25 |
hematopoietic oligopotent progenitor cell | 8.58e-10 | 161 |
hematopoietic multipotent progenitor cell | 8.58e-10 | 161 |
hematopoietic cell | 9.09e-10 | 177 |
CD8-positive, alpha-beta T cell | 4.78e-09 | 11 |
lymphoid lineage restricted progenitor cell | 6.73e-09 | 52 |
lymphocyte | 1.64e-08 | 53 |
common lymphoid progenitor | 1.64e-08 | 53 |
hematopoietic lineage restricted progenitor cell | 6.26e-08 | 120 |
nongranular leukocyte | 1.19e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.22e-24 | 114 |
neural tube | 1.59e-08 | 56 |
neural rod | 1.59e-08 | 56 |
future spinal cord | 1.59e-08 | 56 |
neural keel | 1.59e-08 | 56 |
regional part of nervous system | 2.10e-07 | 53 |
regional part of brain | 2.10e-07 | 53 |