FFCP PHASE1:Hg19::chr21:39821025..39821046,-: Difference between revisions
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|id=chr21:39821025..39821046,-
|short_description=p9@ERG
|description=CAGE_peak_9_at_ERG_5end
|association_with_transcript=0bp_to_ENST00000473107_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2078 | |EntrezGene=2078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3446 | |HGNC=3446 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000473107_5end | |||
|cluster_id=chr21:39821025..39821046,- | |||
|description=CAGE_peak_9_at_ERG_5end | |||
|id=chr21:39821025..39821046,- | |||
|ontology_enrichment_celltype=CL:0000153!9.37e-27!9;CL:0000447!9.37e-27!9;CL:0000667!6.27e-21!6;CL:0000058!6.27e-21!6;CL:0000138!6.27e-21!6;CL:0000327!7.62e-17!14;CL:0000499!9.74e-11!27;CL:0000214!8.83e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.24e-87;9!CL:0000447;2.24e-87;9!CL:0000138;1.26e-58;6!CL:0000327;1.39e-52;15!CL:0000499;2.44e-38;28!CL:0000214;1.98e-30;3!CL:0000151;3.18e-18;36!CL:0000135;9.66e-09;3!CL:0000388;9.66e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.08e-87,9;CL:0000447,2.08e-87,9;CL:0000058,1.36e-58,6;CL:0000138,1.36e-58,6;CL:0000327,1.33e-52,15;CL:0000499,2.37e-38,28;CL:0000214,1.71e-30,3;CL:0000151,4.73e-22,36;CL:0000135,9.66e-09,3;CL:0000388,9.66e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.59e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004905!1.16e-09!5;UBERON:0000982!1.16e-09!5;UBERON:0004770!1.16e-09!5;UBERON:0007023!7.52e-08!115;UBERON:0006915!8.83e-08!3;UBERON:0002018!8.83e-08!3;UBERON:0002217!8.83e-08!3;UBERON:0007616!8.83e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.98e-30;3!UBERON:0007616;1.98e-30;3!UBERON:0002217;1.98e-30;3!UBERON:0002018;1.98e-30;3!UBERON:0004905;4.42e-12;8!UBERON:0000982;4.42e-12;8!UBERON:0004770;4.42e-12;8!UBERON:0004457;7.58e-11;9!UBERON:0000042;7.58e-11;9!UBERON:0007846;9.66e-09;3!UBERON:0000043;9.66e-09;3!UBERON:0007845;9.66e-09;3!UBERON:0000486;2.29e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.71e-30,3;UBERON:0007616,1.71e-30,3;UBERON:0002217,1.71e-30,3;UBERON:0002018,1.71e-30,3;UBERON:0004905,4.18e-12,8;UBERON:0000982,4.18e-12,8;UBERON:0004770,4.18e-12,8;UBERON:0007846,9.66e-09,3;UBERON:0000043,9.66e-09,3;UBERON:0007845,9.66e-09,3;UBERON:0004457,2.20e-08,12;UBERON:0000042,2.20e-08,12 | |||
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|short_description=p9@ERG | |||
}} | }} |
Latest revision as of 10:23, 18 September 2015
Short description: | p9@ERG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ERG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000473107_5end |
EntrezGene: | ERG |
HGNC: | 3446 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.08e-87 | 9 |
carbohydrate secreting cell | 2.08e-87 | 9 |
chondroblast | 1.36e-58 | 6 |
chondrocyte | 1.36e-58 | 6 |
extracellular matrix secreting cell | 1.33e-52 | 15 |
stromal cell | 2.37e-38 | 28 |
synovial cell | 1.71e-30 | 3 |
secretory cell | 4.73e-22 | 36 |
fibrocyte | 9.66e-09 | 3 |
tendon cell | 9.66e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.71e-30 | 3 |
layer of synovial tissue | 1.71e-30 | 3 |
synovial joint | 1.71e-30 | 3 |
synovial membrane of synovial joint | 1.71e-30 | 3 |
articulation | 4.18e-12 | 8 |
skeletal joint | 4.18e-12 | 8 |
articular system | 4.18e-12 | 8 |
dense regular connective tissue | 9.66e-09 | 3 |
tendon | 9.66e-09 | 3 |
regular connective tissue | 9.66e-09 | 3 |
cavity lining | 2.20e-08 | 12 |
serous membrane | 2.20e-08 | 12 |