FFCP PHASE1:Hg19::chr1:48462566..48462595,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388630 | |EntrezGene=388630 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=A6NFA1 | |UniProt=A6NFA1 | ||
|association_with_transcript=-4bp_to_NM_001194986_5end | |association_with_transcript=-4bp_to_NM_001194986_5end | ||
|cluster_id=chr1:48462566..48462595,- | |||
|description=CAGE_peak_2_at_LOC388630_5end | |description=CAGE_peak_2_at_LOC388630_5end | ||
|id=chr1:48462566..48462595,- | |id=chr1:48462566..48462595,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.70e-10;10!UBERON:0007687;3.70e-10;10!UBERON:0003104;4.33e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-16!115;UBERON:0002365!5.64e-10!31;UBERON:0002330!5.64e-10!31;UBERON:0002417!2.77e-08!61;UBERON:0000916!2.77e-08!61;UBERON:0000466!6.79e-08!126;UBERON:0005172!1.01e-07!55;UBERON:0005173!1.01e-07!55;UBERON:0002530!1.86e-07!59;UBERON:0003135!4.14e-07!11;UBERON:0003103!4.59e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!1.27e-16!115;UBERON:0002365!5.64e-10!31;UBERON:0002330!5.64e-10!31;UBERON:0002417!2.77e-08!61;UBERON:0000916!2.77e-08!61;UBERON:0000466!6.79e-08!126;UBERON:0005172!1.01e-07!55;UBERON:0005173!1.01e-07!55;UBERON:0002530!1.86e-07!59;UBERON:0003135!4.14e-07!11;UBERON:0003103!4.59e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002365;1.97e-09;31!UBERON:0002330;1.97e-09;31!UBERON:0005172;8.29e-08;52!UBERON:0005173;8.29e-08;52!UBERON:0002107;3.32e-07;19!UBERON:0006925;3.32e-07;19!UBERON:0002423;4.34e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.02e-11,54;UBERON:0005173,1.02e-11,54;UBERON:0002417,3.07e-10,60;UBERON:0000916,3.07e-10,60;UBERON:0002365,3.18e-09,31;UBERON:0002330,3.18e-09,31;UBERON:0009854,8.91e-08,23;UBERON:0005177,1.01e-07,101;UBERON:0002107,3.11e-07,19;UBERON:0006925,3.11e-07,19;UBERON:0008836,3.11e-07,19;UBERON:0009497,4.59e-07,25;UBERON:0000015,4.59e-07,25;UBERON:0002423,4.59e-07,25;UBERON:0006235,4.59e-07,25;UBERON:0004161,4.59e-07,25;UBERON:0002113,6.78e-07,26;UBERON:0003918,6.78e-07,26;UBERON:0011143,6.78e-07,26;UBERON:0005095,6.78e-07,26;UBERON:0007687,6.78e-07,26;UBERON:0009856,9.07e-07,26 | |||
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| ||
|short_description=p2@LOC388630 | |short_description=p2@LOC388630 | ||
}} | }} |
Latest revision as of 10:23, 18 September 2015
Short description: | p2@LOC388630 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC388630_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_NM_001194986_5end |
EntrezGene: | LOC388630 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.02e-11 | 54 |
abdominal segment element | 1.02e-11 | 54 |
abdominal segment of trunk | 3.07e-10 | 60 |
abdomen | 3.07e-10 | 60 |
exocrine gland | 3.18e-09 | 31 |
exocrine system | 3.18e-09 | 31 |
digestive tract diverticulum | 8.91e-08 | 23 |
trunk region element | 1.01e-07 | 101 |
liver | 3.11e-07 | 19 |
digestive gland | 3.11e-07 | 19 |
liver bud | 3.11e-07 | 19 |
epithelium of foregut-midgut junction | 4.59e-07 | 25 |
anatomical boundary | 4.59e-07 | 25 |
hepatobiliary system | 4.59e-07 | 25 |
foregut-midgut junction | 4.59e-07 | 25 |
septum transversum | 4.59e-07 | 25 |
kidney | 6.78e-07 | 26 |
kidney mesenchyme | 6.78e-07 | 26 |
upper urinary tract | 6.78e-07 | 26 |
kidney rudiment | 6.78e-07 | 26 |
kidney field | 6.78e-07 | 26 |
sac | 9.07e-07 | 26 |