FFCP PHASE1:Hg19::chr17:79970924..79970946,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79058 | |EntrezGene=79058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13825 | |HGNC=13825 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-163bp_to_AK127311_5end | |association_with_transcript=-163bp_to_AK127311_5end | ||
|cluster_id=chr17:79970924..79970946,+ | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_6_at_ASPSCR1_5end | |description=CAGE_peak_6_at_ASPSCR1_5end | ||
|id=chr17:79970924..79970946,+ | |id=chr17:79970924..79970946,+ | ||
|ontology_enrichment_celltype=CL:0002541!4.15e-19!3;CL:0002563!7.42e-07!4 | |ontology_enrichment_celltype=CL:0002541!4.15e-19!3;CL:0002563!7.42e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.50e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.40e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.60e-08!106;DOID:0050619!1.20e-07!1;DOID:1357!1.20e-07!1;DOID:178!3.85e-07!1;DOID:326!3.85e-07!1;DOID:3978!3.85e-07!1;DOID:3394!3.85e-07!1;DOID:5844!3.85e-07!1 | |ontology_enrichment_disease=DOID:305!2.60e-08!106;DOID:0050619!1.20e-07!1;DOID:1357!1.20e-07!1;DOID:178!3.85e-07!1;DOID:326!3.85e-07!1;DOID:3978!3.85e-07!1;DOID:3394!3.85e-07!1;DOID:5844!3.85e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.70e-40;1!DOID:1357;2.70e-40;1!DOID:5409;2.53e-11;4!DOID:0050615;5.99e-11;16!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.21e-40,1;DOID:1357,2.21e-40,1;DOID:5409,2.53e-11,4;DOID:0050615,5.84e-11,16;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.80e-53!9;UBERON:0001557!2.29e-24!19;UBERON:0000476!4.15e-19!3;UBERON:0000920!4.15e-19!3;UBERON:0008947!3.16e-17!38;UBERON:0003258!3.16e-17!38;UBERON:0003124!4.60e-14!7;UBERON:0000065!9.21e-12!53;UBERON:0000072!1.93e-11!46;UBERON:0005631!1.21e-10!14;UBERON:0000158!1.21e-10!14;UBERON:0001004!8.45e-10!72;UBERON:0000063!6.60e-08!97;UBERON:0001764!1.20e-07!1;UBERON:0001825!1.20e-07!1;UBERON:0001242!7.42e-07!4;UBERON:0001262!7.42e-07!4;UBERON:0004786!7.42e-07!4;UBERON:0004808!7.42e-07!4;UBERON:0001277!7.42e-07!4 | |ontology_enrichment_uberon=UBERON:0001737!4.80e-53!9;UBERON:0001557!2.29e-24!19;UBERON:0000476!4.15e-19!3;UBERON:0000920!4.15e-19!3;UBERON:0008947!3.16e-17!38;UBERON:0003258!3.16e-17!38;UBERON:0003124!4.60e-14!7;UBERON:0000065!9.21e-12!53;UBERON:0000072!1.93e-11!46;UBERON:0005631!1.21e-10!14;UBERON:0000158!1.21e-10!14;UBERON:0001004!8.45e-10!72;UBERON:0000063!6.60e-08!97;UBERON:0001764!1.20e-07!1;UBERON:0001825!1.20e-07!1;UBERON:0001242!7.42e-07!4;UBERON:0001262!7.42e-07!4;UBERON:0004786!7.42e-07!4;UBERON:0004808!7.42e-07!4;UBERON:0001277!7.42e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.70e-40;1!UBERON:0001825;2.70e-40;1!UBERON:0003124;1.50e-14;3!UBERON:0000920;1.50e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.21e-40,1;UBERON:0001825,2.21e-40,1;UBERON:0000920,1.40e-14,3;UBERON:0003124,5.38e-07,7 | |||
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|short_description=p6@ASPSCR1 | |short_description=p6@ASPSCR1 | ||
}} | }} |
Latest revision as of 10:33, 18 September 2015
Short description: | p6@ASPSCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ASPSCR1_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | -163bp_to_AK127311_5end |
EntrezGene: | ASPSCR1 |
HGNC: | 13825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.40e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.21e-40 | 1 |
paranasal sinus | 2.21e-40 | 1 |
egg chorion | 1.40e-14 | 3 |
chorion | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.21e-40 | 1 |
maxillary sinus cancer | 2.21e-40 | 1 |
lung small cell carcinoma | 2.53e-11 | 4 |
respiratory system cancer | 5.84e-11 | 16 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |