FFCP PHASE1:Hg19::chr2:74517717..74517732,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57835 | |EntrezGene=57835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18168 | |HGNC=18168 | ||
|TSSclassifier=strong | |||
|UniProt=C9JNL6 | |UniProt=C9JNL6 | ||
|association_with_transcript=99bp_to_ENST00000432728_5end | |association_with_transcript=99bp_to_ENST00000432728_5end | ||
|cluster_id=chr2:74517717..74517732,- | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_9_at_SLC4A5_5end | |description=CAGE_peak_9_at_SLC4A5_5end | ||
|id=chr2:74517717..74517732,- | |id=chr2:74517717..74517732,- | ||
|ontology_enrichment_celltype=CL:0000791!1.05e-20!18;CL:0000789!1.05e-20!18;CL:0002420!1.05e-20!18;CL:0002419!1.05e-20!18;CL:0000790!1.05e-20!18;CL:0000624!1.38e-20!6;CL:0000084!9.05e-18!25;CL:0000827!9.05e-18!25;CL:0000838!6.73e-11!52;CL:0000542!1.20e-10!53;CL:0000051!1.20e-10!53;CL:0000784!7.71e-08!3;CL:0000898!1.44e-07!3;CL:0000625!2.51e-07!11 | |ontology_enrichment_celltype=CL:0000791!1.05e-20!18;CL:0000789!1.05e-20!18;CL:0002420!1.05e-20!18;CL:0002419!1.05e-20!18;CL:0000790!1.05e-20!18;CL:0000624!1.38e-20!6;CL:0000084!9.05e-18!25;CL:0000827!9.05e-18!25;CL:0000838!6.73e-11!52;CL:0000542!1.20e-10!53;CL:0000051!1.20e-10!53;CL:0000784!7.71e-08!3;CL:0000898!1.44e-07!3;CL:0000625!2.51e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.12e-17;3!CL:0000840;1.57e-09;5!CL:0000990;8.85e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.12e-17,3;CL:0000840,1.57e-09,5;CL:0001029,1.57e-09,5;CL:0000990,8.85e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.01e-40;5!UBERON:0003056;8.70e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.14e-10!2;UBERON:0001896!2.74e-07!3;UBERON:0005290!2.74e-07!3;UBERON:0010096!2.74e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.01e-40;5!UBERON:0000966;3.10e-11;5!UBERON:0005388;3.10e-11;5!UBERON:0001802;3.10e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.81e-40,5;UBERON:0004117,1.81e-40,5;UBERON:0007689,1.81e-40,5;UBERON:0007123,1.81e-40,5;UBERON:0003091,1.81e-40,5;UBERON:0009722,4.28e-19,11;UBERON:0007690,4.28e-19,11;UBERON:0008814,4.07e-12,18;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0002368,9.98e-07,35 | |||
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|short_description=p9@SLC4A5 | |short_description=p9@SLC4A5 | ||
}} | }} |
Latest revision as of 10:34, 18 September 2015
Short description: | p9@SLC4A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC4A5_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | 99bp_to_ENST00000432728_5end |
EntrezGene: | SLC4A5 |
HGNC: | 18168 |
UniProt: | C9JNL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.12e-17 | 3 |
immature conventional dendritic cell | 1.57e-09 | 5 |
common dendritic progenitor | 1.57e-09 | 5 |
conventional dendritic cell | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.81e-40 | 5 |
pharyngeal pouch | 1.81e-40 | 5 |
thyroid diverticulum | 1.81e-40 | 5 |
pharyngeal pouch 2 | 1.81e-40 | 5 |
thyroid primordium | 1.81e-40 | 5 |
entire pharyngeal arch endoderm | 4.28e-19 | 11 |
early pharyngeal endoderm | 4.28e-19 | 11 |
pharyngeal arch system | 4.07e-12 | 18 |
retina | 1.44e-09 | 6 |
photoreceptor array | 1.44e-09 | 6 |
posterior segment of eyeball | 1.44e-09 | 6 |
endocrine gland | 9.98e-07 | 35 |