FFCP PHASE1:Hg19::chr15:63336209..63336321,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7168 | |EntrezGene=7168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12010 | |HGNC=12010 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000559831_5end | |association_with_transcript=-18bp_to_ENST00000559831_5end | ||
|cluster_id=chr15:63336209..63336321,+ | |||
|coexpression_cluster_id=C1041 | |coexpression_cluster_id=C1041 | ||
|description=CAGE_peak_6_at_TPM1_5end | |description=CAGE_peak_6_at_TPM1_5end | ||
|id=chr15:63336209..63336321,+ | |id=chr15:63336209..63336321,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.27e-19!180;CL:0000222!1.47e-13!119;CL:0000359!5.88e-12!32;CL:0000192!1.33e-11!42;CL:0000514!1.33e-11!42;CL:0002321!4.01e-11!248;CL:0000680!5.25e-11!57;CL:0000056!5.25e-11!57;CL:0000355!5.25e-11!57;CL:0000220!8.47e-11!246;CL:0000187!3.99e-10!54;CL:0000393!6.18e-10!60;CL:0000211!6.18e-10!60;CL:0000183!1.08e-09!59;CL:0000077!3.97e-08!19;CL:0000057!4.13e-08!75 | |ontology_enrichment_celltype=CL:0000055!2.27e-19!180;CL:0000222!1.47e-13!119;CL:0000359!5.88e-12!32;CL:0000192!1.33e-11!42;CL:0000514!1.33e-11!42;CL:0002321!4.01e-11!248;CL:0000680!5.25e-11!57;CL:0000056!5.25e-11!57;CL:0000355!5.25e-11!57;CL:0000220!8.47e-11!246;CL:0000187!3.99e-10!54;CL:0000393!6.18e-10!60;CL:0000211!6.18e-10!60;CL:0000183!1.08e-09!59;CL:0000077!3.97e-08!19;CL:0000057!4.13e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.27e-13;32!CL:0000077;4.11e-09;19!CL:0000192;1.36e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.46e-13,32;CL:0000192,7.59e-12,43;CL:0000514,7.59e-12,43;CL:0000222,6.49e-10,121;CL:0000680,1.21e-09,58;CL:0000056,1.21e-09,58;CL:0000355,1.21e-09,58;CL:0000077,7.14e-09,19;CL:0000187,1.12e-08,55;CL:0000393,1.47e-08,61;CL:0000211,1.47e-08,61;CL:0000057,1.66e-07,76;CL:0002321,2.16e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.36e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.48e-13!143;UBERON:0002385!1.94e-13!63;UBERON:0001015!1.94e-13!63;UBERON:0000383!1.94e-13!63;UBERON:0001134!4.15e-13!61;UBERON:0002036!4.15e-13!61;UBERON:0003082!4.15e-13!61;UBERON:0000486!6.35e-13!82;UBERON:0004872!1.33e-12!84;UBERON:0004290!2.04e-12!70;UBERON:0000914!4.51e-12!83;UBERON:0002329!4.51e-12!83;UBERON:0003077!4.51e-12!83;UBERON:0003059!4.51e-12!83;UBERON:0007282!4.51e-12!83;UBERON:0009618!4.51e-12!83;UBERON:0007285!4.51e-12!83;UBERON:0002100!7.12e-12!216;UBERON:0000475!1.32e-11!365;UBERON:0002049!2.16e-11!79;UBERON:0007798!2.16e-11!79;UBERON:0003914!3.90e-11!118;UBERON:0000468!5.25e-11!659;UBERON:0000481!8.98e-11!347;UBERON:0003104!3.36e-10!238;UBERON:0009142!3.36e-10!238;UBERON:0001637!3.76e-10!42;UBERON:0003509!3.76e-10!42;UBERON:0004572!3.76e-10!42;UBERON:0001009!5.66e-10!113;UBERON:0001981!7.99e-10!60;UBERON:0007500!7.99e-10!60;UBERON:0004537!7.99e-10!60;UBERON:0006965!7.99e-10!60;UBERON:0000055!2.31e-09!69;UBERON:0004573!9.15e-09!33;UBERON:0004571!9.15e-09!33;UBERON:0004535!9.47e-09!110;UBERON:0003103!1.09e-08!69;UBERON:0007100!1.92e-08!27;UBERON:0000490!2.38e-08!138;UBERON:0000119!1.03e-07!312;UBERON:0000483!1.31e-07!309;UBERON:0000467!1.44e-07!625;UBERON:0000480!2.14e-07!626;UBERON:0003886!7.12e-07!63 | |ontology_enrichment_uberon=UBERON:0005256!1.48e-13!143;UBERON:0002385!1.94e-13!63;UBERON:0001015!1.94e-13!63;UBERON:0000383!1.94e-13!63;UBERON:0001134!4.15e-13!61;UBERON:0002036!4.15e-13!61;UBERON:0003082!4.15e-13!61;UBERON:0000486!6.35e-13!82;UBERON:0004872!1.33e-12!84;UBERON:0004290!2.04e-12!70;UBERON:0000914!4.51e-12!83;UBERON:0002329!4.51e-12!83;UBERON:0003077!4.51e-12!83;UBERON:0003059!4.51e-12!83;UBERON:0007282!4.51e-12!83;UBERON:0009618!4.51e-12!83;UBERON:0007285!4.51e-12!83;UBERON:0002100!7.12e-12!216;UBERON:0000475!1.32e-11!365;UBERON:0002049!2.16e-11!79;UBERON:0007798!2.16e-11!79;UBERON:0003914!3.90e-11!118;UBERON:0000468!5.25e-11!659;UBERON:0000481!8.98e-11!347;UBERON:0003104!3.36e-10!238;UBERON:0009142!3.36e-10!238;UBERON:0001637!3.76e-10!42;UBERON:0003509!3.76e-10!42;UBERON:0004572!3.76e-10!42;UBERON:0001009!5.66e-10!113;UBERON:0001981!7.99e-10!60;UBERON:0007500!7.99e-10!60;UBERON:0004537!7.99e-10!60;UBERON:0006965!7.99e-10!60;UBERON:0000055!2.31e-09!69;UBERON:0004573!9.15e-09!33;UBERON:0004571!9.15e-09!33;UBERON:0004535!9.47e-09!110;UBERON:0003103!1.09e-08!69;UBERON:0007100!1.92e-08!27;UBERON:0000490!2.38e-08!138;UBERON:0000119!1.03e-07!312;UBERON:0000483!1.31e-07!309;UBERON:0000467!1.44e-07!625;UBERON:0000480!2.14e-07!626;UBERON:0003886!7.12e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.70e-08;25 | |||
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| ||
|short_description=p6@TPM1 | |short_description=p6@TPM1 | ||
}} | }} |
Latest revision as of 11:28, 18 September 2015
Short description: | p6@TPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TPM1_5end |
Coexpression cluster: | C1041_heart_hepatic_left_mesodermal_smooth_spindle_skeletal |
Association with transcript: | -18bp_to_ENST00000559831_5end |
EntrezGene: | TPM1 |
HGNC: | 12010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.46e-13 | 32 |
smooth muscle cell | 7.59e-12 | 43 |
smooth muscle myoblast | 7.59e-12 | 43 |
mesodermal cell | 6.49e-10 | 121 |
muscle precursor cell | 1.21e-09 | 58 |
myoblast | 1.21e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.21e-09 | 58 |
mesothelial cell | 7.14e-09 | 19 |
muscle cell | 1.12e-08 | 55 |
electrically responsive cell | 1.47e-08 | 61 |
electrically active cell | 1.47e-08 | 61 |
fibroblast | 1.66e-07 | 76 |
embryonic cell | 2.16e-07 | 250 |