FFCP PHASE1:Hg19::chr8:53322304..53322340,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=9705 | |EntrezGene=9705 | ||
Line 8: | Line 8: | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000520279,ENST00000520811,ENST00000521549,ENST00000524183,uc003xrc.2,uc010lyb.2_5end | |association_with_transcript=0bp_to_ENST00000520279,ENST00000520811,ENST00000521549,ENST00000524183,uc003xrc.2,uc010lyb.2_5end | ||
|cluster_id=chr8:53322304..53322340,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_ST18_5end | |description=CAGE_peak_1_at_ST18_5end |
Latest revision as of 11:33, 18 September 2015
Short description: | p1@ST18 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ST18_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000520279, ENST00000520811, ENST00000521549, ENST00000524183, uc003xrc.2, uc010lyb.2_5end |
EntrezGene: | ST18 |
HGNC: | 18695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@ST18 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.44e-125 | 56 |
neural rod | 1.44e-125 | 56 |
future spinal cord | 1.44e-125 | 56 |
neural keel | 1.44e-125 | 56 |
regional part of nervous system | 3.31e-114 | 53 |
regional part of brain | 3.31e-114 | 53 |
central nervous system | 5.16e-100 | 81 |
brain | 3.51e-95 | 68 |
future brain | 3.51e-95 | 68 |
nervous system | 1.27e-93 | 89 |
Showing 1 to 10 of 99 entries