FFCP PHASE1:Hg19::chr2:17935383..17935439,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=348654 | |EntrezGene=348654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26881 | |HGNC=26881 | ||
|TSSclassifier=strong | |||
|UniProt=Q17RS7,E9PLG0,E9PM30 | |UniProt=Q17RS7,E9PLG0,E9PM30 | ||
|association_with_transcript=0bp_to_ENST00000381254,ENST00000524465,ENST00000532257,NM_001130009,uc002rcu.2,uc010yjs.1_5end | |association_with_transcript=0bp_to_ENST00000381254,ENST00000524465,ENST00000532257,NM_001130009,uc002rcu.2,uc010yjs.1_5end | ||
|cluster_id=chr2:17935383..17935439,+ | |||
|coexpression_cluster_id=C109 | |coexpression_cluster_id=C109 | ||
|description=CAGE_peak_1_at_GEN1_5end | |description=CAGE_peak_1_at_GEN1_5end | ||
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|ontology_enrichment_celltype=CL:0000012!3.20e-08!682;CL:0000548!3.31e-08!679;CL:0000004!3.31e-08!679;CL:0000255!3.31e-08!679;CL:0002319!2.95e-07!25;CL:0000066!3.65e-07!254 | |ontology_enrichment_celltype=CL:0000012!3.20e-08!682;CL:0000548!3.31e-08!679;CL:0000004!3.31e-08!679;CL:0000255!3.31e-08!679;CL:0002319!2.95e-07!25;CL:0000066!3.65e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.92e-07;25 | |ontology_enrichment_celltype_v019=CL:0002319;2.92e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.55e-07,25;CL:0000066,3.07e-07,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!5.68e-49!235;DOID:14566!3.43e-47!239;DOID:0050686!1.31e-26!137;DOID:2531!4.68e-26!51;DOID:0060083!4.68e-26!51;DOID:0050687!7.08e-22!143;DOID:1240!8.33e-21!39;DOID:8692!3.22e-16!31;DOID:305!1.11e-15!106;DOID:0060058!9.87e-07!10 | |ontology_enrichment_disease=DOID:162!5.68e-49!235;DOID:14566!3.43e-47!239;DOID:0050686!1.31e-26!137;DOID:2531!4.68e-26!51;DOID:0060083!4.68e-26!51;DOID:0050687!7.08e-22!143;DOID:1240!8.33e-21!39;DOID:8692!3.22e-16!31;DOID:305!1.11e-15!106;DOID:0060058!9.87e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.49e-16;39!DOID:2531;4.04e-16;51!DOID:0060083;4.04e-16;51!DOID:8692;7.47e-16;31!DOID:0050686;8.18e-07;137!DOID:0060058;8.42e-07;10 | |ontology_enrichment_disease_v019=DOID:1240;1.49e-16;39!DOID:2531;4.04e-16;51!DOID:0060083;4.04e-16;51!DOID:8692;7.47e-16;31!DOID:0050686;8.18e-07;137!DOID:0060058;8.42e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:162,1.60e-49,235;DOID:14566,1.50e-47,239;DOID:0050686,1.07e-26,137;DOID:2531,2.49e-26,51;DOID:0060083,2.49e-26,51;DOID:0050687,3.55e-22,143;DOID:1240,5.08e-21,39;DOID:8692,2.21e-16,31;DOID:305,8.14e-16,106;DOID:0060058,8.63e-07,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@GEN1 | |short_description=p1@GEN1 | ||
}} | }} |
Latest revision as of 11:39, 18 September 2015
Short description: | p1@GEN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GEN1_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000381254, ENST00000524465, ENST00000532257, NM_001130009, uc002rcu.2, uc010yjs.1_5end |
EntrezGene: | GEN1 |
HGNC: | 26881 |
UniProt: | Q17RS7E9PLG0E9PM30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.55e-07 | 25 |
epithelial cell | 3.07e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.60e-49 | 235 |
disease of cellular proliferation | 1.50e-47 | 239 |
organ system cancer | 1.07e-26 | 137 |
hematologic cancer | 2.49e-26 | 51 |
immune system cancer | 2.49e-26 | 51 |
cell type cancer | 3.55e-22 | 143 |
leukemia | 5.08e-21 | 39 |
myeloid leukemia | 2.21e-16 | 31 |
carcinoma | 8.14e-16 | 106 |
lymphoma | 8.63e-07 | 10 |