FFCP PHASE1:Hg19::chr11:58695177..58695188,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92292 | |EntrezGene=92292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30519 | |HGNC=30519 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000533864_5end | |association_with_transcript=0bp_to_ENST00000533864_5end | ||
|cluster_id=chr11:58695177..58695188,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_7_at_GLYATL1_5end | |description=CAGE_peak_7_at_GLYATL1_5end | ||
|id=chr11:58695177..58695188,+ | |id=chr11:58695177..58695188,+ | ||
|ontology_enrichment_celltype=CL:0002322!6.11e-27!5;CL:0002563!6.20e-13!4;CL:0002253!4.95e-12!2;CL:0000540!4.87e-09!6;CL:0000031!4.87e-09!6;CL:0000404!4.87e-09!6;CL:0000064!5.64e-08!3;CL:0005012!5.64e-08!3;CL:0000067!5.64e-08!3;CL:0002304!5.64e-08!3;CL:0000047!7.01e-07!8 | |ontology_enrichment_celltype=CL:0002322!6.11e-27!5;CL:0002563!6.20e-13!4;CL:0002253!4.95e-12!2;CL:0000540!4.87e-09!6;CL:0000031!4.87e-09!6;CL:0000404!4.87e-09!6;CL:0000064!5.64e-08!3;CL:0005012!5.64e-08!3;CL:0000067!5.64e-08!3;CL:0002304!5.64e-08!3;CL:0000047!7.01e-07!8 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.76e-13;11!UBERON:0009497;3.94e-11;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!6.20e-13!4;UBERON:0001262!6.20e-13!4;UBERON:0004786!6.20e-13!4;UBERON:0004808!6.20e-13!4;UBERON:0001277!6.20e-13!4;UBERON:0003350!1.91e-10!5;UBERON:0003929!2.07e-08!54;UBERON:0001778!5.64e-08!3;UBERON:0001775!5.64e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.07e-17;2!UBERON:0002757;1.07e-17;2!UBERON:0010134;1.07e-17;2!UBERON:0005408;1.07e-17;2!UBERON:0001899;1.07e-17;2!UBERON:0002107;2.16e-16;19!UBERON:0006925;2.16e-16;19!UBERON:0002368;7.29e-14;33!UBERON:0002423;1.18e-12;25!UBERON:0000949;7.71e-12;43!UBERON:0002365;3.81e-10;31!UBERON:0002330;3.81e-10;31!UBERON:0003296;1.57e-09;4!UBERON:0010133;1.57e-09;4!UBERON:0002784;1.57e-09;4!UBERON:0002530;7.62e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.07e-17,2;UBERON:0002757,1.07e-17,2;UBERON:0010134,1.07e-17,2;UBERON:0005408,1.07e-17,2;UBERON:0001899,1.07e-17,2;UBERON:0002107,2.16e-16,19;UBERON:0006925,2.16e-16,19;UBERON:0008836,2.16e-16,19;UBERON:0002368,1.22e-15,35;UBERON:0008835,2.85e-14,22;UBERON:0003894,2.85e-14,22;UBERON:0009854,1.10e-13,23;UBERON:0007499,1.18e-12,25;UBERON:0009497,1.18e-12,25;UBERON:0000015,1.18e-12,25;UBERON:0002423,1.18e-12,25;UBERON:0006235,1.18e-12,25;UBERON:0004161,1.18e-12,25;UBERON:0000949,2.66e-12,45;UBERON:0009856,3.38e-12,26;UBERON:0002365,2.36e-10,31;UBERON:0002330,2.36e-10,31;UBERON:0003296,1.57e-09,4;UBERON:0010133,1.57e-09,4;UBERON:0002784,1.57e-09,4;UBERON:0002530,1.63e-09,59 | |||
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|short_description=p7@GLYATL1 | |short_description=p7@GLYATL1 | ||
}} | }} |
Latest revision as of 11:40, 18 September 2015
Short description: | p7@GLYATL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GLYATL1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000533864_5end |
EntrezGene: | GLYATL1 |
HGNC: | 30519 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.07e-17 | 2 |
regional part of epithalamus | 1.07e-17 | 2 |
secretory circumventricular organ | 1.07e-17 | 2 |
circumventricular organ | 1.07e-17 | 2 |
epithalamus | 1.07e-17 | 2 |
liver | 2.16e-16 | 19 |
digestive gland | 2.16e-16 | 19 |
liver bud | 2.16e-16 | 19 |
endocrine gland | 1.22e-15 | 35 |
hepatic diverticulum | 2.85e-14 | 22 |
liver primordium | 2.85e-14 | 22 |
digestive tract diverticulum | 1.10e-13 | 23 |
epithelial sac | 1.18e-12 | 25 |
epithelium of foregut-midgut junction | 1.18e-12 | 25 |
anatomical boundary | 1.18e-12 | 25 |
hepatobiliary system | 1.18e-12 | 25 |
foregut-midgut junction | 1.18e-12 | 25 |
septum transversum | 1.18e-12 | 25 |
endocrine system | 2.66e-12 | 45 |
sac | 3.38e-12 | 26 |
exocrine gland | 2.36e-10 | 31 |
exocrine system | 2.36e-10 | 31 |
gland of diencephalon | 1.57e-09 | 4 |
neuroendocrine gland | 1.57e-09 | 4 |
regional part of diencephalon | 1.57e-09 | 4 |
gland | 1.63e-09 | 59 |