FFCP PHASE1:Hg19::chr7:37960465..37960476,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:37960465..37960476,+
|short_description=p6@EPDR1
|description=CAGE_peak_6_at_EPDR1_5end
|association_with_transcript=205bp_to_ENST00000423717_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54749 | |EntrezGene=54749 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17572 | |HGNC=17572 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=205bp_to_ENST00000423717_5end | |||
|cluster_id=chr7:37960465..37960476,+ | |||
|coexpression_cluster_id=C2894 | |||
|description=CAGE_peak_6_at_EPDR1_5end | |||
|id=chr7:37960465..37960476,+ | |||
|ontology_enrichment_celltype=CL:0000136!3.59e-10!15;CL:0000055!3.45e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.78e-15;13!CL:0002334;2.81e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.55e-15,15;CL:0002334,4.79e-07,12;CL:1000306,9.16e-07,4;CL:0002547,9.16e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.19e-11!115;UBERON:0000025!2.20e-10!194;UBERON:0003075!3.99e-10!86;UBERON:0007284!3.99e-10!86;UBERON:0000477!1.67e-09!286;UBERON:0004111!2.61e-09!241;UBERON:0002616!2.63e-09!59;UBERON:0001049!3.97e-09!57;UBERON:0005068!3.97e-09!57;UBERON:0006241!3.97e-09!57;UBERON:0007135!3.97e-09!57;UBERON:0002346!4.33e-09!90;UBERON:0000475!7.27e-09!365;UBERON:0000119!1.92e-08!312;UBERON:0000955!5.61e-08!69;UBERON:0006238!5.61e-08!69;UBERON:0000483!7.63e-08!309;UBERON:0005743!1.40e-07!86;UBERON:0001017!5.25e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.40e-12;9!UBERON:0000042;9.40e-12;9!UBERON:0003688;1.00e-10;6!UBERON:0002358;1.00e-10;6!UBERON:0003684;1.00e-10;6!UBERON:0001178;1.00e-10;6!UBERON:0002680;2.82e-09;9!UBERON:0001895;2.82e-09;9!UBERON:0004733;1.90e-08;12!UBERON:0002028;1.90e-08;12!UBERON:0004732;1.22e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.03e-10,6;UBERON:0002358,1.03e-10,6;UBERON:0003684,1.03e-10,6;UBERON:0001178,1.03e-10,6;UBERON:0004457,4.04e-10,12;UBERON:0000042,4.04e-10,12;UBERON:0002680,2.05e-09,9;UBERON:0001895,2.05e-09,9;UBERON:0010092,2.05e-09,9;UBERON:0004733,1.27e-08,12;UBERON:0002028,1.27e-08,12;UBERON:0007277,1.27e-08,12;UBERON:0003076,4.96e-08,15;UBERON:0003057,4.96e-08,15;UBERON:0004732,8.44e-08,13;UBERON:0000415,9.16e-07,4;UBERON:0007240,9.16e-07,4;UBERON:0005742,9.16e-07,4;UBERON:0005734,9.16e-07,4;UBERON:0004664,9.16e-07,4;UBERON:0004663,9.16e-07,4 | |||
|phase1_expression=5.63202975738726,2.78330681058278,6.90676580070259,4.00293193412522,7.15137751083661,7.85104671690332,5.06599756336621,1.26343974685366,1.56711376919903,0.491467873003018,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0,1.23121058076788,1.42800483870977,1.56727360739044,0.286235987131057,0.410623275218653,0.125542639594803,0.152826811495903,0.328402357799783,0.393553906568396,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0.880801318004542,0,0,0,0,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,1.40648818027883,1.44575660953827,2.00535164254356,2.17269778441236,0,0,0.189069634328136,0.443458794925128,0,1.17881167947941,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0.357198913136319,0.44905874525234,0.225222960966644,0,0,0,0,0,0,1.49091585508596,1.64619665163954,1.72131935057184,4.30254931123221,2.4826786753885,0.560677600142307,1.06748995729705,2.71334303258876,0.311211035399766,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0.368502951935304,0.206651562351531,2.37600571456411,0.494533858557114,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0.877955241761676,0.612975591598039,2.55404700141215,0.680593098960126,0,0,0,0.600182192168805,0.412210116953756,0,0,0,0.194874010322397,0,0.0920498986422993,0.969876340912871,0,0.302256294682921,0.169560592310488,0,0,0,0.121973706129595,0,0,0.414644220061482,0,0,0,0,0,0.928735856063958,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0,1.02940686179115,0,0,0,0,0.325808305310325,0,1.44331342025273,0.231860809950154,2.46558257895225,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0.63497894292169,0.381988425558278,0,0,0.308482478109971,0,0.571652865261156,0.784917590417525,3.48768055066624,0.51336800074665,0.129271715757778,0,1.690605505112,1.32969058292435,1.04007436911366,0.257207374262142,0,0.532844358032199,0,0,0,0.977208552881205,0,0,4.22015127883421,2.61460037580088,4.39881161201051,0,0,0,0.718874566474748,0,0,1.15825045334063,0.61642896765115,2.32779252211864,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,1.2269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0,0.157702415033935,0.234282829985426,0,2.27407504055985,0,0,0,0.0868836144680828,0.195801157462741,1.02943027143257,0,0,0,0,0,0,3.96972492510043,1.07423381301644,1.12264037773229,9.48229704492187,2.55853624533352,4.02134802859019,7.42090332224955,0,1.24293207719189,0.410635780069046,0,0.232420756919918,0,0.40101294060657,0.0920809889358963,0.114814448164607,0.182091168006717,2.36023946926963,0.902399225814824,0.385076685522074,0.784349769176855,0,0.527758144464379,2.27466768141793,0.510281115829547,0.647747748306418,0,0.541892875087706,2.00675909541941,0.764628819135115,0,0.447749509444357,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.413509717453592,0.537101224341368,0.580066775656914,0.0852266274161009,0.534192213880424,0,0.192190067365106,0,0.2023155617111,0,1.5740617341532,0,1.84820148105653,2.66153015158511,0,1.11194531462352,1.5743737541619,0.372158369359667,0.632758849437452,1.33441135746677,0,0,0.95460974377781,0.78494864019923,0,1.09814811894422,0.235624804691373,3.43710218674637,4.75530963519025,0.421258456238981,0,3.1682753652067,0,0.272999822815972,0,2.26016233240486,0,1.99031692572366,0.876901770507525,0.578775534266688,0,0.405820753925408,0.92947049429925,0,0,0.0982490410131212,0.7133421029625,0,2.32218398827431,3.29294892959902,0.379473173765715,0.699869440489966,0,0,0,0.470719003883896,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0.797131363644112,0.59873811429845,0.5745161103971,0.211673582723883,0,0.561594356226918,0.456469358066384,0,0,1.01575066680962,0.1605880751037,0,0,0,0,0.223676107892416,0.166849141711909,0.586164286206121,0.278406173895242,0,2.16364542780786,1.33228787199128,0,0,0.586032717087576,0.485442086998054,0,0,0,0,0,0,0.562677665642051,0,0.659215496907038,0,0.996239941255349,0,0,0.511343412510774,0.369254416383208,0,0,0,0,0.493217028184668,0,1.11136990144637,0,0.649376687132959,0,0,0,0,0,0,0.236387681767936,0,0,0.347249989866585,0,0.120596438625408,3.05163472634166,0.663475559587348,1.47773809476774,1.31631238292384,0,0,2.15460723810632,0.91153644677601,0,0,0.108647371922008,0,0.641183153813036,0,0,0.784901281975124,0.498635045700469,0,0,0,0,0.476809736941136,1.26598838716816,0.326465616318295,0,0,0,0.530745387020035,0,0.889563386041866,0.123563938946503,0.730953646538188,0.134802265961354,0.802577647298789,0.937057782901357,0,0,0.48556075906818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| ||
|short_description=p6@EPDR1 | |||
}} | }} |
Latest revision as of 11:58, 18 September 2015
Short description: | p6@EPDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EPDR1_5end |
Coexpression cluster: | C2894_Preadipocyte_Adipocyte_tenocyte_pons_mesenchymal_Mesothelial_Smooth |
Association with transcript: | 205bp_to_ENST00000423717_5end |
EntrezGene: | EPDR1 |
HGNC: | 17572 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.55e-15 | 15 |
preadipocyte | 4.79e-07 | 12 |
fibroblast of tunica adventitia of artery | 9.16e-07 | 4 |
fibroblast of the aortic adventitia | 9.16e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.03e-10 | 6 |
peritoneum | 1.03e-10 | 6 |
abdominal cavity | 1.03e-10 | 6 |
visceral peritoneum | 1.03e-10 | 6 |
cavity lining | 4.04e-10 | 12 |
serous membrane | 4.04e-10 | 12 |
regional part of metencephalon | 2.05e-09 | 9 |
metencephalon | 2.05e-09 | 9 |
future metencephalon | 2.05e-09 | 9 |
segmental subdivision of hindbrain | 1.27e-08 | 12 |
hindbrain | 1.27e-08 | 12 |
presumptive hindbrain | 1.27e-08 | 12 |
posterior neural tube | 4.96e-08 | 15 |
chordal neural plate | 4.96e-08 | 15 |
segmental subdivision of nervous system | 8.44e-08 | 13 |
artery wall | 9.16e-07 | 4 |
tunica adventitia of artery | 9.16e-07 | 4 |
adventitia | 9.16e-07 | 4 |
tunica adventitia of blood vessel | 9.16e-07 | 4 |
aorta tunica adventitia | 9.16e-07 | 4 |
aorta wall | 9.16e-07 | 4 |