FFCP PHASE1:Hg19::chr12:47473475..47473484,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347902 | |EntrezGene=347902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24073 | |HGNC=24073 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-50bp_to_ENST00000550413_5end | |association_with_transcript=-50bp_to_ENST00000550413_5end | ||
|cluster_id=chr12:47473475..47473484,- | |||
|coexpression_cluster_id=C893 | |||
|description=CAGE_peak_9_at_AMIGO2_5end | |description=CAGE_peak_9_at_AMIGO2_5end | ||
|id=chr12:47473475..47473484,- | |id=chr12:47473475..47473484,- | ||
|ontology_enrichment_celltype=CL:0002076!2.04e-09!43;CL:0000066!2.31e-09!254;CL:0000223!4.02e-07!59 | |ontology_enrichment_celltype=CL:0002076!2.04e-09!43;CL:0000066!2.31e-09!254;CL:0000223!4.02e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000244;5.04e-08;4!CL:0000731;5.04e-08;4!CL:0002076;9.92e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.35e-08,4;CL:0000731,2.35e-08,4;CL:0002076,3.65e-07,42;CL:0000066,4.22e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!1.42e-11!27;DOID:193!1.70e-11!29;DOID:2394!2.11e-08!14;DOID:1749!1.43e-07!14 | |ontology_enrichment_disease=DOID:120!1.42e-11!27;DOID:193!1.70e-11!29;DOID:2394!2.11e-08!14;DOID:1749!1.43e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.23e-14;14!DOID:120;2.07e-10;27!DOID:193;1.49e-09;29!DOID:4929;7.70e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.53e-14,14;DOID:120,1.80e-10,27;DOID:193,1.31e-09,29;DOID:4929,1.46e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;9.40e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.31e-08,13;UBERON:0000365,9.47e-07,5 | |||
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| ||
|short_description=p9@AMIGO2 | |short_description=p9@AMIGO2 | ||
}} | }} |
Latest revision as of 12:09, 18 September 2015
Short description: | p9@AMIGO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_AMIGO2_5end |
Coexpression cluster: | C893_osteoclastoma_Urothelial_tubular_nonsmall_Mesenchymal_Renal_hepatic |
Association with transcript: | -50bp_to_ENST00000550413_5end |
EntrezGene: | AMIGO2 |
HGNC: | 24073 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.35e-08 | 4 |
urothelial cell | 2.35e-08 | 4 |
endo-epithelial cell | 3.65e-07 | 42 |
epithelial cell | 4.22e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.31e-08 | 13 |
urothelium | 9.47e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.53e-14 | 14 |
female reproductive organ cancer | 1.80e-10 | 27 |
reproductive organ cancer | 1.31e-09 | 29 |
tubular adenocarcinoma | 1.46e-07 | 2 |